Evidence map›Paper›PMID 31594830›Full record

ArticlemSystems2019

Using DNA Metabarcoding To Evaluate the Plant Component of Human Diets: a Proof of Concept.

Aspen T Reese, Tyler R Kartzinel, Brianna L Petrone, Peter J Turnbaugh, Robert M Pringle, Lawrence A David

Registry-linked trialAbstract read
In one paragraph

Article in mSystems, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05610137 (Application of the 24-hour Recall Methodology Assisted by Digital Photographs and Homologation With Colombian Foods for the Analysis of Dietary Intake), which is not on this map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05610137 completednot on this mapstarted 2022, after this paper: background citation

Application of the 24-hour Recall Methodology Assisted by Digital Photographs and Homologation With Colombian Foods for the Analysis of Dietary Intake

TypeobservationalSponsorVanessa Corrales AgudeloRan2022 to 2022Enrolled20ConditionsDietary Intake
3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Sequencing what we eat.Nature reviews. Gastroenterology & hepatology · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. DNA-utilization loci enable exogenous DNA metabolism in gut Bacteroidales.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Diversity of plant DNA in stool is linked to dietary quality, age, and household income.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  15. Administration ofFrontiers in microbiology · 2023
    Article
  16. Article
  17. Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Aspen T Reese *Society of Fellows, Harvard University, Cambridge, Massachusetts, USA.ORCID https://orcid.org/0000-0001-9004-9470
Tyler R Kartzinel *Department of Ecology and Evolutionary Biology, Brown University, Providence, Rhode Island, USA.ORCID https://orcid.org/0000-0002-8488-0580
Brianna L PetroneMedical Scientist Training Program, Duke University, Durham, North Carolina, USA.ORCID https://orcid.org/0000-0003-4778-7595
Peter J TurnbaughDepartment of Microbiology and Immunology, University of California San Francisco, San Francisco, California, USA.ORCID https://orcid.org/0000-0002-0888-2875
Robert M PringleDepartment of Ecology and Evolutionary Biology, Princeton University, Princeton, New Jersey, USA rpringle@princeton.edu lawrence.david@duke.edu.ORCID https://orcid.org/0000-0001-7487-5393
Lawrence A DavidDepartment of Molecular Genetics and Microbiology, Duke University, Durham, North Carolina, USA rpringle@princeton.edu lawrence.david@duke.edu.ORCID https://orcid.org/0000-0002-3570-4767

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007171 · NIGMS · DUKE UNIVERSITY · PI KONTOS, CHRISTOPHER D · 1985 to 2021
$31.2M
National Gnotobiotic Rodent Resource CenterP40OD010995 · OD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Ryan B Sartor · 2012 to 2026
$9.7M
NIGMS NIH HHS T32 GM007171NIH HHS P40 OD010995
6 · The paper itself

Abstract

Dietary intake is difficult to measure reliably in humans because approaches typically rely on self-reporting, which can be incomplete and biased. In field studies of animals, DNA sequencing-based approaches such as metabarcoding have been developed to characterize diets, but such approaches have not previously been widely applied to humans. Here, we present data derived from sequencing of a chloroplast DNA marker (the P6 loop of the

Indexed as

diet logDNA metabarcodinghuman diettrnL(UAA)-P6

Identifiers

PMID31594830
PMCPMC6787566

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.