Evidence map›Paper›PMID 31592439›Full record

ArticleJournal of medical imaging (Bellingham, Wash.)2019

Active learning strategy and hybrid training for infarct segmentation on diffusion MRI with a U-shaped network.

Aurélien Olivier, Olivier Moal, Bertrand Moal, Fanny Munsch, Gosuke Okubo, Igor Sibon, Vincent Dousset, Thomas Tourdias

Abstract read
In one paragraph

Article in Journal of medical imaging (Bellingham, Wash.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Aurélien OlivierDESKi, Bordeaux, France.
Olivier MoalDESKi, Bordeaux, France.
Bertrand MoalDESKi, Bordeaux, France.ORCID https://orcid.org/0000-0001-9197-721X
Fanny MunschUniversité de Bordeaux, Neurocentre Magendie, Inserm U1215, Bordeaux, France.
Gosuke OkuboUniversité de Bordeaux, Neurocentre Magendie, Inserm U1215, Bordeaux, France.
Igor SibonUniversité Bordeaux Segalen, CHU de Bordeaux, Unité Neuro-Vasculaire, Bordeaux, France.
Vincent DoussetUniversité de Bordeaux, Neurocentre Magendie, Inserm U1215, Bordeaux, France.
Thomas TourdiasUniversité de Bordeaux, Neurocentre Magendie, Inserm U1215, Bordeaux, France.ORCID https://orcid.org/0000-0002-7151-6325

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Automatic and reliable stroke lesion segmentation from diffusion magnetic resonance imaging (MRI) is critical for patient care. Methods using neural networks have been developed, but the rate of false positives limits their use in clinical practice. A training strategy applied to three-dimensional deconvolutional neural networks for stroke lesion segmentation on diffusion MRI was proposed. Infarcts were segmented by experts on diffusion MRI for 929 patients. We divided each database as follows: 60% for a training set, 20% for validation, and 20% for testing. Our hypothesis was a two-phase hybrid learning scheme, in which the network was first trained with whole MRI (regular phase) and then, in a second phase (hybrid phase), alternately with whole MRI and patches. Patches were actively selected from the discrepancy between expert and model segmentation at the beginning of each batch. On the test population, the performances after the regular and hybrid phases were compared. A statistically significant Dice improvement with hybrid training compared with regular training was demonstrated (

Indexed as

active learningdeep learningdiffusion-weighted imagingfully convolutional networksischemic stroke lesion segmentationpatches

Identifiers

PMID31592439
PMCPMC6777650

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.