Evidence map›Paper›PMID 31586085›Full record

ArticleScientific reports2019

Changes in the microsomal proteome of tomato fruit during ripening.

Daniela Pontiggia, Francesco Spinelli, Claudia Fabbri, Valerio Licursi, Rodolfo Negri, Giulia De Lorenzo, Benedetta Mattei

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
5.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 28 citations in OpenAlex.

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  7. Identification, Classification, and Expression Analysis of theInternational journal of molecular sciences · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Daniela PontiggiaDepartment of Biology and Biotechnology "C. Darwin", Sapienza University of Rome, Rome, Italy.ORCID http://orcid.org/0000-0002-0980-107X
Francesco SpinelliDepartment of Biology and Biotechnology "C. Darwin", Sapienza University of Rome, Rome, Italy.
Claudia FabbriDepartment of Biology and Biotechnology "C. Darwin", Sapienza University of Rome, Rome, Italy.
Valerio LicursiDepartment of Biology and Biotechnology "C. Darwin", Sapienza University of Rome, Rome, Italy.
Rodolfo NegriDepartment of Biology and Biotechnology "C. Darwin", Sapienza University of Rome, Rome, Italy.
Giulia De LorenzoDepartment of Biology and Biotechnology "C. Darwin", Sapienza University of Rome, Rome, Italy. giulia.delorenzo@uniroma1.it.
Benedetta MatteiDepartment of Life, Health and Environmental Sciences, University of L'Aquila, L'Aquila, Italy.
Sapienza University of Rome · ITIstituto Pasteur · ITNational Research Council · ITUniversity of L'Aquila · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The variations in the membrane proteome of tomato fruit pericarp during ripening have been investigated by mass spectrometry-based label-free proteomics. Mature green (MG30) and red ripe (R45) stages were chosen because they are pivotal in the ripening process: MG30 corresponds to the end of cellular expansion, when fruit growth has stopped and fruit starts ripening, whereas R45 corresponds to the mature fruit. Protein patterns were markedly different: among the 1315 proteins identified with at least two unique peptides, 145 significantly varied in abundance in the process of fruit ripening. The subcellular and biochemical fractionation resulted in GO term enrichment for organelle proteins in our dataset, and allowed the detection of low-abundance proteins that were not detected in previous proteomic studies on tomato fruits. Functional annotation showed that the largest proportion of identified proteins were involved in cell wall metabolism, vesicle-mediated transport, hormone biosynthesis, secondary metabolism, lipid metabolism, protein synthesis and degradation, carbohydrate metabolic processes, signalling and response to stress.

Indexed as

FruitGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantMass SpectrometryMicrosomesProteomeProteomicsSolanum lycopersicumProteome

Identifiers

PMID31586085
PMCPMC6778153
OpenAlexW2978877397

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.