Evidence map›Paper›PMID 31585998›Full record

ArticleApplied and environmental microbiology2019

Glucose-Mediated Repression of Plant Biomass Utilization in the White-Rot Fungus

Paul Daly, Mao Peng, Marcos Di Falco, Anna Lipzen, Mei Wang, Vivian Ng, Igor V Grigoriev, Adrian Tsang, Miia R Mäkelä, Ronald P de Vries

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
5.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 36 citations in OpenAlex.

  1. Review
  2. Article
  3. The Zn(II)2Cys6 transcription factorApplied and environmental microbiology · 2026
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  6. Biological Characteristics and Domestication ofJournal of fungi (Basel, Switzerland) · 2025
    Article
  7. Article
  8. Article
  9. Genomic and Secretomic Analyses of the Newly Isolated FungusApplied and environmental microbiology · 2023
    Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. The Secretome ofFrontiers in bioengineering and biotechnology · 2020
    Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 4 countries.

Paul DalyFungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Utrecht, The Netherlands.ORCID 0000-0002-6863-2536
Mao PengFungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Utrecht, The Netherlands.
Marcos Di FalcoCenter for Structural and Functional Genomics, Concordia University, Montreal, Quebec, Canada.
Anna LipzenU.S. Department of Energy Joint Genome Institute, Walnut Creek, California, USA.
Mei WangU.S. Department of Energy Joint Genome Institute, Walnut Creek, California, USA.
Vivian NgU.S. Department of Energy Joint Genome Institute, Walnut Creek, California, USA.
Igor V GrigorievU.S. Department of Energy Joint Genome Institute, Walnut Creek, California, USA.
Adrian TsangCenter for Structural and Functional Genomics, Concordia University, Montreal, Quebec, Canada.
Miia R MäkeläDepartment of Microbiology, University of Helsinki, Helsinki, Finland.ORCID 0000-0003-0771-2329
Ronald P de VriesFungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Utrecht, The Netherlands r.devries@wi.knaw.nl.ORCID 0000-0002-4363-1123
Joint Genome Institute · USConcordia University · CAUniversity of Helsinki · FIUtrecht University · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The extent of carbon catabolite repression (CCR) at a global level is unknown in wood-rotting fungi, which are critical to the carbon cycle and are a source of biotechnological enzymes. CCR occurs in the presence of sufficient concentrations of easily metabolizable carbon sources (e.g., glucose) and involves downregulation of the expression of genes encoding enzymes involved in the breakdown of complex carbon sources. We investigated this phenomenon in the white-rot fungus

Indexed as

Catabolite RepressionGlucosePolyporaceaeWoodGlucosecarbon catabolite repressionCAZymesDichomitusregulation

Identifiers

PMID31585998
PMCPMC6856337
OpenAlexW2980054850

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.