Evidence map›Paper›PMID 31584428›Full record

ArticleeLife2019

DeepFly3D, a deep learning-based approach for 3D limb and appendage tracking in tethered, adult

Semih Günel, Helge Rhodin, Daniel Morales, João Campagnolo, Pavan Ramdya, Pascal Fua

Abstract read
In one paragraph

Article in eLife, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Whole-body 3D kinematics of freely behavingbioRxiv : the preprint server for biology · 2026
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  11. A parametric finite element model of leg campaniform sensilla inJournal of the Royal Society, Interface · 2025
    Article
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  18. Mapping the landscape of social behavior.bioRxiv : the preprint server for biology · 2024
    Article
  19. Article
  20. Article

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Semih GünelComputer Vision Laboratory, School of Computer and Communication Sciences, EPFL, Lausanne, Switzerland.
Helge RhodinComputer Vision Laboratory, School of Computer and Communication Sciences, EPFL, Lausanne, Switzerland.ORCID 0000-0003-2692-0801
Daniel MoralesNeuroengineering Laboratory, Brain Mind Institute & Interfaculty Institute of Bioengineering, School of Life Sciences, EPFL, Lausanne, Switzerland.ORCID 0000-0002-7469-0898
João CampagnoloNeuroengineering Laboratory, Brain Mind Institute & Interfaculty Institute of Bioengineering, School of Life Sciences, EPFL, Lausanne, Switzerland.
Pavan Ramdya *Neuroengineering Laboratory, Brain Mind Institute & Interfaculty Institute of Bioengineering, School of Life Sciences, EPFL, Lausanne, Switzerland.ORCID 0000-0001-5425-4610
Pascal Fua *Computer Vision Laboratory, School of Computer and Communication Sciences, EPFL, Lausanne, Switzerland.

Funding

EPFL iPhDMicrosoft Research JRC ProjectSchweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung 175667Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung 181239Swiss Government Excellence Postdoctoral Scholarship 2018.0483
6 · The paper itself

Abstract

Studying how neural circuits orchestrate limbed behaviors requires the precise measurement of the positions of each appendage in three-dimensional (3D) space. Deep neural networks can estimate two-dimensional (2D) pose in freely behaving and tethered animals. However, the unique challenges associated with transforming these 2D measurements into reliable and precise 3D poses have not been addressed for small animals including the fly,

Indexed as

MovementSoftwareAnimalsBehavior, AnimalDeep LearningDrosophilaExtremitiesImaging, Three-DimensionalOptical Imaging3D pose estimationanimal behaviorcomputer visiondeep learningD. melanogasterneuroscienceunsupervised classification

Identifiers

PMID31584428
PMCPMC6828327

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.