Evidence map›Paper›PMID 31584099›Full record

ArticleNucleic acids research2020

gutMDisorder: a comprehensive database for dysbiosis of the gut microbiota in disorders and interventions.

Liang Cheng, Changlu Qi, He Zhuang, Tongze Fu, Xue Zhang

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 97 papers.

0numbers the graph read from it
0cells of the map it votes in
97citing papers in PubMed
11.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

97 citing papers in PubMed, 196 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. DiMB-RE: mining the scientific literature for diet-microbiome associations.Journal of the American Medical Informatics Association : JAMIA · 2025
    Article
  6. Article
  7. BGMDB: A curated database linking gut microbiota dysbiosis to brain disorders.Computational and structural biotechnology journal · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. An Inflammatory Bowel Diseases Integrated Resources Portal (IBDIRP).Database : the journal of biological databases and curation · 2024
    Article
  14. The African Human Microbiome Portal: a public web portal of curated metagenomic metadata.Database : the journal of biological databases and curation · 2024
    Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Gut microbes · 2023
    Article

37 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Liang ChengNHC and CAMS Key Laboratory of Molecular Probe and Targeted Theranostics, Harbin Medical University, Harbin, Heilongjiang, China, 150028.
Changlu QiCollege of Bioinformatics Science and Technology, Harbin Medical University, Harbin, Heilongjiang, China, 150081.
He ZhuangCollege of Bioinformatics Science and Technology, Harbin Medical University, Harbin, Heilongjiang, China, 150081.
Tongze FuCollege of Bioinformatics Science and Technology, Harbin Medical University, Harbin, Heilongjiang, China, 150081.
Xue ZhangNHC and CAMS Key Laboratory of Molecular Probe and Targeted Theranostics, Harbin Medical University, Harbin, Heilongjiang, China, 150028.
Harbin Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

gutMDisorder (http://bio-annotation.cn/gutMDisorder), a manually curated database, aims at providing a comprehensive resource of dysbiosis of the gut microbiota in disorders and interventions. Alterations in the composition of the gut microbial community play crucial roles in the development of chronic disorders. And the beneficial effects of drugs, foods and other intervention measures on disorders could be microbially mediated. The current version of gutMDisorder documents 2263 curated associations between 579 gut microbes and 123 disorders or 77 intervention measures in Human, and 930 curated associations between 273 gut microbes and 33 disorders or 151 intervention measures in Mouse. Each entry in the gutMDisorder contains detailed information on an association, including an intestinal microbe, a disorder name, intervention measures, experimental technology and platform, characteristic of samples, web sites for downloading the sequencing data, a brief description of the association, a literature reference, and so on. gutMDisorder provides a user-friendly interface to browse, retrieve each entry using gut microbes, disorders, and intervention measures. It also offers pages for downloading all the entries and submitting new experimentally validated associations.

Indexed as

Databases, GeneticDatabases, PharmaceuticalGastrointestinal MicrobiomeSoftwareAnimalsAnti-Bacterial AgentsBacteriaDysbiosisGenes, BacterialHumansMetagenomeMiceAnti-Bacterial Agents

Identifiers

PMID31584099
PMCPMC6943049
OpenAlexW4255502791

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.