Evidence map›Paper›PMID 31584078›Full record

ArticleNucleic acids research2020

Genus for biomolecules.

Paweł Rubach, Sebastian Zajac, Borys Jastrzebski, Joanna I Sulkowska, Piotr Sułkowski

Abstract read
In one paragraph

Article in Nucleic acids research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Paweł RubachCentre of New Technologies, University of Warsaw, Banacha 2c, 02-097 Warsaw, Poland.
Sebastian ZajacWarsaw School of Economics, Al. Niepodległości 162, 02-554 Warsaw, Poland.
Borys JastrzebskiCentre of New Technologies, University of Warsaw, Banacha 2c, 02-097 Warsaw, Poland.
Joanna I SulkowskaCentre of New Technologies, University of Warsaw, Banacha 2c, 02-097 Warsaw, Poland.
Piotr SułkowskiFaculty of Physics, University of Warsaw, Pasteura 5, 02-093 Warsaw, Poland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The 'Genus for biomolecules' database (http://genus.fuw.edu.pl) collects information about topological structure and complexity of proteins and RNA chains, which is captured by the genus of a given chain and its subchains. For each biomolecule, this information is shown in the form of a genus trace plot, as well as a genus matrix diagram. We assemble such information for all and RNA structures deposited in the Protein Data Bank (PDB). This database presents also various statistics and extensive information about the biological function of the analyzed biomolecules. The database is regularly self-updating, once new structures are deposited in the PDB. Moreover, users can analyze their own structures.

Indexed as

Databases, GeneticProteinsRNAComputational BiologyModels, MolecularSoftwareStructure-Activity RelationshipUser-Computer InterfaceWeb BrowserProteinsRNA

Identifiers

PMID31584078
PMCPMC6943057

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.