Evidence map›Paper›PMID 31582854›Full record

ArticleNature structural & molecular biology2019

FACT mediates cohesin function on chromatin.

Jonay Garcia-Luis, Luciana Lazar-Stefanita, Pilar Gutierrez-Escribano, Agnes Thierry, Axel Cournac, Alicia García, Sara González, Mar Sánchez, Adam Jarmuz, Alex Montoya and 6 more

Open access · greenAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Structural Maintenance of Chromosomes Complexes.Methods in molecular biology (Clifton, N.J.) · 2025
    Review
  3. Article
  4. Article
  5. Article
  6. International journal of molecular sciences · 2023
    Article
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  12. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 3 countries.

Jonay Garcia-LuisCell Cycle Group, MRC London Institute of Medical Sciences (LMS), London, UK.
Luciana Lazar-StefanitaInstitut Pasteur, Department of Genomes and Genetics, Unité Régulation Spatiale des Génomes, Paris, France.
Pilar Gutierrez-EscribanoCell Cycle Group, MRC London Institute of Medical Sciences (LMS), London, UK.
Agnes ThierryInstitut Pasteur, Department of Genomes and Genetics, Unité Régulation Spatiale des Génomes, Paris, France.
Axel CournacInstitut Pasteur, Department of Genomes and Genetics, Unité Régulation Spatiale des Génomes, Paris, France.
Alicia GarcíaInstituto de Biología Funcional y Genómica (IBFG), CSIC/Universidad de Salamanca, Salamanca, Spain.
Sara GonzálezInstituto de Biología Funcional y Genómica (IBFG), CSIC/Universidad de Salamanca, Salamanca, Spain.
Mar SánchezInstituto de Biología Funcional y Genómica (IBFG), CSIC/Universidad de Salamanca, Salamanca, Spain.
Adam JarmuzCell Cycle Group, MRC London Institute of Medical Sciences (LMS), London, UK.
Alex MontoyaBiological Mass Spectrometry and Proteomics Facility, MRC London Institute of Medical Sciences (LMS), London, UK.
Marian DoreBioinformatics Facility, MRC London Institute of Medical Sciences (LMS), London, UK.
Holger KramerBiological Mass Spectrometry and Proteomics Facility, MRC London Institute of Medical Sciences (LMS), London, UK.
Mohammad M KarimiBioinformatics Facility, MRC London Institute of Medical Sciences (LMS), London, UK.ORCID http://orcid.org/0000-0001-5017-1252
Francisco AntequeraInstituto de Biología Funcional y Genómica (IBFG), CSIC/Universidad de Salamanca, Salamanca, Spain.
Romain KoszulInstitut Pasteur, Department of Genomes and Genetics, Unité Régulation Spatiale des Génomes, Paris, France. romain.koszul@pasteur.fr.ORCID http://orcid.org/0000-0002-3086-1173
Luis AragonCell Cycle Group, MRC London Institute of Medical Sciences (LMS), London, UK. luis.aragon@csc.mrc.ac.uk.ORCID http://orcid.org/0000-0003-0634-6742
MRC London Institute of Medical Sciences · GBInstitut Pasteur · FRUniversidad de Salamanca · ES

Funding

Medical Research Council MC_U120074328Wellcome TrustWellcome Trust 100955
6 · The paper itself

Abstract

Cohesin is a regulator of genome architecture with roles in sister chromatid cohesion and chromosome compaction. The recruitment and mobility of cohesin complexes on DNA is restricted by nucleosomes. Here, we show that the role of cohesin in chromosome organization requires the histone chaperone FACT ('facilitates chromatin transcription') in Saccharomyces cerevisiae. We find that FACT interacts directly with cohesin, and is dynamically required for its localization on chromatin. Depletion of FACT in metaphase cells prevents cohesin accumulation at pericentric regions and causes reduced binding on chromosome arms. Using the Hi-C technique, we show that cohesin-dependent TAD (topological associated domain)-like structures in G1 and metaphase chromosomes are reduced in the absence of FACT. Sister chromatid cohesion is intact in FACT-depleted cells, although chromosome segregation failure is observed. Our data show that FACT contributes to the formation of cohesin-dependent TADs, thus uncovering a new role for this complex in nuclear organization during interphase and mitotic chromosome folding.

Indexed as

Cell Cycle ProteinsChromatinChromosomal Proteins, Non-HistoneCohesinsDNA-Binding ProteinsHigh Mobility Group ProteinsProtein Interaction MapsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsStructural Maintenance of Chromosome Protein 1Transcriptional Elongation FactorsCell Cycle ProteinsChromatinChromosomal Proteins, Non-HistoneCohesinsDNA-Binding ProteinsFACT protein, S cerevisiaeHigh Mobility Group ProteinsSaccharomyces cerevisiae ProteinsSPT16 protein, S cerevisiaeStructural Maintenance of Chromosome Protein 1Transcriptional Elongation Factors

Identifiers

PMID31582854
PMCPMC6779571
OpenAlexW2977661777

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.