Evidence map›Paper›PMID 31582816›Full record

ArticleScientific reports2019

Otoferlin Depletion Results in Abnormal Synaptic Ribbons and Altered Intracellular Calcium Levels in Zebrafish.

Aayushi Manchanda, Paroma Chatterjee, Josephine A Bonventre, Derik E Haggard, Katie S Kindt, Robert L Tanguay, Colin P Johnson

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.5field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. [Study on gene therapy for DPOAE and ABR threshold changes in adultLin chuang er bi yan hou tou jing wai ke za zhi = Journal of clinical otorhinolaryngology head and neck surgery · 2024
    Article
  5. Article
  6. Article
  7. Otoferlin as a multirole CaFrontiers in cellular neuroscience · 2023
    Review
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Aayushi ManchandaMolecular and Cellular Biology Program, Oregon State University, Corvallis, Oregon, USA.
Paroma ChatterjeeMolecular and Cellular Biology Program, Oregon State University, Corvallis, Oregon, USA.
Josephine A BonventreDepartment of Biochemistry and Biophysics, Oregon State University, Corvallis, Oregon, USA.
Derik E HaggardDepartment of Environmental and Molecular Toxicology, Oregon State University, Corvallis, Oregon, USA.
Katie S KindtNational Institute of Deafness and Other Communication Disorders (NIDCD), NIH, Maryland, USA.ORCID http://orcid.org/0000-0002-1065-8215
Robert L TanguayMolecular and Cellular Biology Program, Oregon State University, Corvallis, Oregon, USA.
Colin P JohnsonMolecular and Cellular Biology Program, Oregon State University, Corvallis, Oregon, USA. colin.johnson@oregonstate.edu.
Oregon State University · USNational Institute on Deafness and Other Communication Disorders · US

Funding

In vivo and in vitro studies of the deafness associated protein otoferlinR01DC014588 · NIDCD · OREGON STATE UNIVERSITY · PI JOHNSON, COLIN P · 2016 to 2020
$1.7M
NIDCD NIH HHS R01 DC014588
6 · The paper itself

Abstract

The protein otoferlin plays an essential role at the sensory hair cell synapse. Mutations in otoferlin result in deafness and depending on the species, mild to strong vestibular deficits. While studies in mouse models suggest a role for otoferlin in synaptic vesicle exocytosis and endocytosis, it is unclear whether these functions are conserved across species. To address this question, we characterized the impact of otoferlin depletion in zebrafish larvae and found defects in synaptic vesicle recycling, abnormal synaptic ribbons, and higher resting calcium concentrations in hair cells. We also observed abnormal expression of the calcium binding hair cell genes s100s and parvalbumin, as well as the nogo related proteins rtn4rl2a and rtn4rl2b. Exogenous otoferlin partially restored expression of genes affected by endogenous otoferlin depletion. Our results suggest that in addition to vesicle recycling, depletion of otoferlin disrupts resting calcium levels, alters synaptic ribbon architecture, and perturbs transcription of hair cells specific genes during zebrafish development.

Indexed as

AnimalsCalciumGene DeletionHair Cells, AuditorySynapsesTranscriptomeZebrafishCalcium

Identifiers

PMID31582816
PMCPMC6776657
OpenAlexW2977404952

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.