Evidence map›Paper›PMID 31582740›Full record

ArticleNature communications2019

A tri-ionic anchor mechanism drives Ube2N-specific recruitment and K63-chain ubiquitination in TRIM ligases.

Leo Kiss, Jingwei Zeng, Claire F Dickson, Donna L Mallery, Ji-Chun Yang, Stephen H McLaughlin, Andreas Boland, David Neuhaus, Leo C James

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 45 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. Crosstalk between protein lipidation and ubiquitination in tumor biology.Apoptosis : an international journal on programmed cell death · 2026
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Chemical Tools for Probing the Ub/Ubl Conjugation Cascades.Chembiochem : a European journal of chemical biology · 2025
    Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 3 countries.

Leo KissMedical Research Council Laboratory of Molecular Biology, Cambridge, UK.
Jingwei ZengMedical Research Council Laboratory of Molecular Biology, Cambridge, UK.ORCID http://orcid.org/0000-0002-9802-6019
Claire F DicksonMedical Research Council Laboratory of Molecular Biology, Cambridge, UK.
Donna L MalleryMedical Research Council Laboratory of Molecular Biology, Cambridge, UK.
Ji-Chun YangMedical Research Council Laboratory of Molecular Biology, Cambridge, UK.ORCID http://orcid.org/0000-0003-1933-5372
Stephen H McLaughlinMedical Research Council Laboratory of Molecular Biology, Cambridge, UK.ORCID http://orcid.org/0000-0001-9135-6253
Andreas BolandMedical Research Council Laboratory of Molecular Biology, Cambridge, UK.
David NeuhausMedical Research Council Laboratory of Molecular Biology, Cambridge, UK.
Leo C JamesMedical Research Council Laboratory of Molecular Biology, Cambridge, UK. lcj@mrc-lmb.cam.ac.uk.
MRC Laboratory of Molecular Biology · GBUniversity of Geneva · CH

Funding

Medical Research Council MC_U105178934Medical Research Council MC_U105181010Medical Research Council U105178934Medical Research Council U105181010Wellcome Trust 200594/Z/16/Z
6 · The paper itself

Abstract

The cytosolic antibody receptor TRIM21 possesses unique ubiquitination activity that drives broad-spectrum anti-pathogen targeting and underpins the protein depletion technology Trim-Away. This activity is dependent on formation of self-anchored, K63-linked ubiquitin chains by the heterodimeric E2 enzyme Ube2N/Ube2V2. Here we reveal how TRIM21 facilitates ubiquitin transfer and differentiates this E2 from other closely related enzymes. A tri-ionic motif provides optimally distributed anchor points that allow TRIM21 to wrap an Ube2N~Ub complex around its RING domain, locking the closed conformation and promoting ubiquitin discharge. Mutation of these anchor points inhibits ubiquitination with Ube2N/Ube2V2, viral neutralization and immune signalling. We show that the same mechanism is employed by the anti-HIV restriction factor TRIM5 and identify spatially conserved ionic anchor points in other Ube2N-recruiting RING E3s. The tri-ionic motif is exclusively required for Ube2N but not Ube2D1 activity and provides a generic E2-specific catalysis mechanism for RING E3s.

Indexed as

Amino Acid MotifsAntiviral Restriction FactorsBiocatalysisCrystallography, X-RayHEK293 CellsHeLa CellsHumansLysineModels, MolecularMutationNuclear Magnetic Resonance, BiomolecularProtein BindingRibonucleoproteinsSS-A AntigenTripartite Motif ProteinsUbiquitinAntiviral Restriction FactorsLysineRibonucleoproteinsSS-A AntigenTRIM5 protein, humanTripartite Motif ProteinsUBE2D1 protein, humanUBE2N protein, humanUbiquitinUbiquitin-Conjugating EnzymesUbiquitin-Protein Ligases

Identifiers

PMID31582740
PMCPMC6776665
OpenAlexW2977821985

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.