Evidence map›Paper›PMID 31582381›Full record

ArticleCancer research2019

Zebrafish MITF-Low Melanoma Subtype Models Reveal Transcriptional Subclusters and MITF-Independent Residual Disease.

Jana Travnickova, Sonia Wojciechowska, Ava Khamseh, Philippe Gautier, Daniel V Brown, Thomas Lefevre, Alessandro Brombin, Ailith Ewing, Amy Capper, Michaela Spitzer and 8 more

Open access · greenAbstract read
In one paragraph

Article in Cancer research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 54 citations in OpenAlex.

  1. Review
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  8. Functional Role of Protein Phosphatase-6 (Current medicinal chemistry · 2025
    Review
  9. Review
  10. The Role of the Neurotrophin Network in Skin Squamous Cell Cancer and the Novel Use of the Zebrafish System.JID innovations : skin science from molecules to population health · 2024
    Review
  11. Review
  12. Article
  13. Review
  14. Review
  15. The journey from melanocytes to melanoma.Nature reviews. Cancer · 2023
    Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 9 institutions in 5 countries.

Jana TravnickovaMRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.ORCID https://orcid.org/0000-0002-8339-9162
Sonia WojciechowskaMRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.ORCID https://orcid.org/0000-0002-1162-3700
Ava KhamsehMRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.ORCID https://orcid.org/0000-0001-5203-2205
Philippe GautierMRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.
Daniel V BrownDepartment of Human Genetics, University of Leuven, KU Leuven, Leuven, Belgium.ORCID https://orcid.org/0000-0002-3594-5851
Thomas LefevreDepartment of Human Genetics, University of Leuven, KU Leuven, Leuven, Belgium.
Alessandro BrombinMRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.ORCID https://orcid.org/0000-0001-8262-9248
Ailith EwingMRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.
Amy CapperMRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.
Michaela SpitzerOpen Targets, Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom; and European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom.
Ramile DilshatDepartment of Biochemistry and Molecular Biology, Faculty of Medicine, University of Iceland, Reykjavik, Iceland.
Colin A SempleMRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.
Marie E MathersDepartment of Pathology, Western General Hospital, Edinburgh, United Kingdom.
James A ListerDepartment of Human and Molecular Genetics and Massey Cancer Center, Virginia Commonwealth University School of Medicine, Richmond, Virginia.ORCID https://orcid.org/0000-0002-8505-6710
Eiríkur SteingrimssonDepartment of Biochemistry and Molecular Biology, Faculty of Medicine, University of Iceland, Reykjavik, Iceland.
Thierry VoetDepartment of Human Genetics, University of Leuven, KU Leuven, Leuven, Belgium.
Chris P PontingMRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.
E Elizabeth PattonMRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom. e.patton@igmm.ed.ac.uk.
Edinburgh Cancer Research · GBInstitute of Genetics and Cancer · GBUniversity of Iceland · ISCenter for Human Genetics · USEuropean Bioinformatics Institute · GBVirginia Commonwealth University · USWalter and Eliza Hall Institute of Medical Research · AUWellcome Sanger Institute · GBWestern General Hospital · GB

Funding

European Research Council 648489Medical Research Council MC_PC_15075Medical Research Council MC_PC_U127585840Medical Research Council MC_UU_00007/15Medical Research Council MC_UU_00007/16Medical Research Council MC_UU_00007/9Medical Research Council MC_UU_00009/1Medical Research Council MC_UU_00009/2Medical Research Council MC_UU_12008/1Medical Research Council MR/R026017/1
6 · The paper itself

Abstract

The melanocyte-inducing transcription factor (MITF)-low melanoma transcriptional signature is predictive of poor outcomes for patients, but little is known about its biological significance, and animal models are lacking. Here, we used zebrafish genetic models with low activity of Mitfa (MITF-low) and established that the MITF-low state is causal of melanoma progression and a predictor of melanoma biological subtype. MITF-low zebrafish melanomas resembled human MITF-low melanomas and were enriched for stem and invasive (mesenchymal) gene signatures. MITF-low activity coupled with a p53 mutation was sufficient to promote superficial growth melanomas, whereas BRAF

Indexed as

AnimalsDrug ResistanceGene Expression ProfilingGene Expression Regulation, NeoplasticMelanocytesMelanomaMicrophthalmia-Associated Transcription FactorNeoplasm Recurrence, LocalNeoplasm, ResidualNeural CrestProto-Oncogene Proteins B-rafStem CellsTranscription, GeneticZebrafishMicrophthalmia-Associated Transcription FactorProto-Oncogene Proteins B-raf

Identifiers

PMID31582381
PMCPMC7116150
OpenAlexW2978097850

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.