Evidence map›Paper›PMID 31581227›Full record

ArticlePloS one2019

Macrogeographic genetic structure of Lutzomyia longipalpis complex populations using Next Generation Sequencing.

Aline Etelvina Casaril, Diego Peres Alonso, Karina Garcia Franco, Marcus Vinicius Niz Alvarez, Suellem Petilim Gomes Barrios, Wagner de Souza Fernandes, Jucelei de Oliveira Moura Infran, Ana Caroline Moura Rodrigues, Paulo Eduardo Martins Ribolla, Alessandra Gutierrez de Oliveira

Abstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Aline Etelvina CasarilPrograma de Pós-Graduação em Doenças Infecciosas e Parasitárias, Universidade Federal de Mato Grosso do Sul, Campo Grande, Mato Grosso do Sul, Brasil.
Diego Peres AlonsoLaboratório de Pesquisas e Análises Genéticas, Departamento de Parasitologia, Universidade Estadual Paulista, Botucatu, São Paulo, Brasil.
Karina Garcia FrancoLaboratório de Parasitologia Humana, Universidade Federal de Mato Grosso do Sul, Campo Grande, Mato Grosso do Sul, Brasil.
Marcus Vinicius Niz AlvarezLaboratório de Pesquisas e Análises Genéticas, Departamento de Parasitologia, Universidade Estadual Paulista, Botucatu, São Paulo, Brasil.
Suellem Petilim Gomes BarriosPrograma de Pós-Graduação em Doenças Infecciosas e Parasitárias, Universidade Federal de Mato Grosso do Sul, Campo Grande, Mato Grosso do Sul, Brasil.
Wagner de Souza FernandesPrograma de Pós-Graduação em Doenças Infecciosas e Parasitárias, Universidade Federal de Mato Grosso do Sul, Campo Grande, Mato Grosso do Sul, Brasil.
Jucelei de Oliveira Moura InfranLaboratório de Parasitologia Humana, Universidade Federal de Mato Grosso do Sul, Campo Grande, Mato Grosso do Sul, Brasil.
Ana Caroline Moura RodriguesLaboratório de Doenças Parasitárias, Universidade Estadual do Ceará, Fortaleza, Ceará.
Paulo Eduardo Martins RibollaLaboratório de Pesquisas e Análises Genéticas, Departamento de Parasitologia, Universidade Estadual Paulista, Botucatu, São Paulo, Brasil.
Alessandra Gutierrez de OliveiraPrograma de Pós-Graduação em Doenças Infecciosas e Parasitárias, Universidade Federal de Mato Grosso do Sul, Campo Grande, Mato Grosso do Sul, Brasil.ORCID 0000-0002-7677-9351

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lutzomyia longipalpis is the main vector of Leishmania infantum, the causative agent of visceral leishmaniasis in the Neotropical realm. Its taxonomic status has been widely discussed once it encompasses a complex of species. The knowledge about the genetic structure of insect vector populations helps the elucidation of components and interactions of the disease ecoepidemiology. Thus, the objective of this study was to genotypically analyze populations of the Lu. longipalpis complex from a macrogeographic perspective using Next Generation Sequencing. Polymorphism analysis of three molecular markers was used to access the levels of population genetic structure among nine different populations of sand flies. Illumina Amplicon Sequencing Protocol® was used to identify possible polymorphic sites. The library was sequenced on paired-end Illumina MiSeq platform. Significant macrogeographical population differentiation was observed among Lu. longipalpis populations via PCA and DAPC analyses. Our results revealed that populations of Lu. longipalpis from the nine municipalities were grouped into three clusters. In addition, it was observed that the levels of Lu. longipalpis population structure could be associated with distance isolation. This new sequencing method allowed us to study different molecular markers after a single sequencing run, and to evaluate population and inter-species differences on a macrogeographic scale.

Indexed as

Genetics, PopulationGenetic StructuresGenome, InsectGenomicsHigh-Throughput Nucleotide SequencingAnimalsBrazilGeographyPsychodidae

Identifiers

PMID31581227
PMCPMC6776309

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.