Evidence map›Paper›PMID 31579817›Full record

ArticleScience advances2019

No evidence of ongoing HIV replication or compartmentalization in tissues during combination antiretroviral therapy: Implications for HIV eradication.

G Bozzi, F R Simonetti, S A Watters, E M Anderson, M Gouzoulis, M F Kearney, P Rote, C Lange, W Shao, R Gorelick and 14 more

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
5.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 94 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 8 institutions in 4 countries.

G BozziHIV Dynamics and Replication Program, NCI, NIH, Frederick, MD, USA.ORCID 0000-0002-4064-4017
F R SimonettiHIV Dynamics and Replication Program, NCI, NIH, Frederick, MD, USA.ORCID 0000-0002-4165-660X
S A WattersHIV Dynamics and Replication Program, NCI, NIH, Frederick, MD, USA.ORCID 0000-0001-6628-1261
E M AndersonHIV Dynamics and Replication Program, NCI, NIH, Frederick, MD, USA.ORCID 0000-0002-1168-4773
M GouzoulisHIV Dynamics and Replication Program, NCI, NIH, Frederick, MD, USA.
M F KearneyHIV Dynamics and Replication Program, NCI, NIH, Frederick, MD, USA.ORCID 0000-0003-3839-6576
P RoteHIV Dynamics and Replication Program, NCI, NIH, Frederick, MD, USA.ORCID 0000-0001-6453-7526
C LangeHIV Dynamics and Replication Program, NCI, NIH, Frederick, MD, USA.
W ShaoAdvanced Biomedical Computing Center, Leidos Biomedical Research Inc., Frederick National Laboratory for Cancer Research, Frederick, MD, USA.
R GorelickAIDS and Cancer Virus Program, Frederick National Laboratory for Cancer Research, Frederick, MD, USA.ORCID 0000-0002-1773-9085
B FullmerAIDS and Cancer Virus Program, Frederick National Laboratory for Cancer Research, Frederick, MD, USA.ORCID 0000-0002-0542-4959
S KumarDigestive Diseases Branch, NIDDK, NIH, Bethesda, MD, USA.ORCID 0000-0003-0549-7768
S WankDigestive Diseases Branch, NIDDK, NIH, Bethesda, MD, USA.
S HewittLaboratory of Pathology, NCI, NIH, Bethesda, MD, USA.ORCID 0000-0001-8283-1788
D E KleinerLaboratory of Pathology, NCI, NIH, Bethesda, MD, USA.ORCID 0000-0003-3442-4453
J HattoriHIV Dynamics and Replication Program, NCI, NIH, Frederick, MD, USA.ORCID 0000-0001-9848-5816
M J BaleHIV Dynamics and Replication Program, NCI, NIH, Frederick, MD, USA.
S HillHIV Dynamics and Replication Program, NCI, NIH, Frederick, MD, USA.
J BellHIV Dynamics and Replication Program, NCI, NIH, Frederick, MD, USA.
C RehmLaboratory of Immunoregulation, NIAID, NIH, Bethesda, MD, USA.ORCID 0000-0003-2049-5824
Z GrossmanHIV Dynamics and Replication Program, NCI, NIH, Frederick, MD, USA.
R YarchoanHIV and AIDS Malignancy Branch, NCI, NIH, Bethesda, MD, USA.ORCID 0000-0002-3057-1395
T UldrickHIV and AIDS Malignancy Branch, NCI, NIH, Bethesda, MD, USA.ORCID 0000-0001-6959-0924
F MaldarelliHIV Dynamics and Replication Program, NCI, NIH, Frederick, MD, USA.ORCID 0000-0002-3062-5250
Center for Cancer Research · USFrederick National Laboratory for Cancer Research · USNational Institute of Diabetes and Digestive and Kidney Diseases · USNational Institutes of Health · USOffice of AIDS Research · USUniversity of Milan · ITLeidos (United States) · USNational Institute of Allergy and Infectious Diseases · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

HIV persistence during combination antiretroviral therapy (cART) is the principal obstacle to cure. Mechanisms responsible for persistence remain uncertain; infections may be maintained by persistence and clonal expansion of infected cells or by ongoing replication in anatomic locations with poor antiretroviral penetration. These mechanisms require different strategies for eradication, and determining their contributions to HIV persistence is essential. We used phylogenetic approaches to investigate, at the DNA level, HIV populations in blood, lymphoid, and other infected tissues obtained at colonoscopy or autopsy in individuals who were on cART for 8 to 16 years. We found no evidence of ongoing replication or compartmentalization of HIV; we did detect clonal expansion of infected cells that were present before cART. Long-term persistence, and not ongoing replication, is primarily responsible for maintaining HIV. HIV-infected cells present when cART is initiated represent the only identifiable source of persistence and is the appropriate focus for eradication.

Indexed as

Virus ReplicationAdolescentAdultAnti-HIV AgentsAntiretroviral Therapy, Highly ActiveChildFemaleHIVHIV InfectionsHumansMaleOrgan SpecificityPhylogenyRNA, ViralSequence Analysis, DNAYoung AdultAnti-HIV AgentsRNA, Viral

Identifiers

PMID31579817
PMCPMC6760922
OpenAlexW2975857794

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.