ArticleDigital Pathology : 15th European congress, ECDP 2019, Warwick, UK, April 10-13, 2019 : proceedings. European Congress on Digital Pathology (15th : 2019 : Warwick, England)2019
Bringing Open Data to Whole Slide Imaging.
Article in Digital Pathology : 15th European congress, ECDP 2019, Warwick, UK, April 10-13, 2019 : proceedings. European Congress on Digital Pathology (15th : 2019 : Warwick, England), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers, 1 of them a synthesis that pooled it.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
40 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Mass spectrometry-based human spatial omics: fundamentals, innovations, and applications.Journal of biomedical science · 2026Pooled it
- Big Data and Artificial Intelligence in Cancer Drug Discovery: Promise, Challenges, and Emerging Opportunities.Cancers · 2026Review
- Spatio-Temporal Expression Patterns of Connexins 43 and 30 in Hippocampal Astrocytes During Postnatal Development.International journal of molecular sciences · 2026Article
- The HuBMAP Framework for Advancing Data FAIRness.bioRxiv : the preprint server for biology · 2026Article
- The evolving role of DICOM in digital pathology.Journal of pathology informatics · 2026Review
- 2D Multimodal Image Collection for Fluorescence Prediction from Transmitted Light Microscopy.Scientific data · 2026Article
- A comprehensive European Colorectal Cancer Cohort dataset.Scientific data · 2026Article
- Considering the missing science of retraining and maintenance in medical artificial intelligence, using ophthalmology as an exemplar.NPJ digital medicine · 2026Review
- Multiplexed high-content imaging uncovers morphological diversity of lymphocyte activation and dysfunction.bioRxiv : the preprint server for biology · 2026Article
- JuNkIE-CLImax: exploring multidimensional images in notebooks and the terminal.microPublication biology · 2026Article
- Digitizing microscope slide-based natural history collections: A protocol using slide scanner technology.PloS one · 2026Article
- Digital neuropathology of neurodegenerative disorders: Foundations, research advances, and future directions.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2025Review
- Article
- Scalable, trustworthy generative model for virtual multi-staining from H&E whole slide images.PLoS computational biology · 2025Article
- Wearing a fur coat in the summertime: Should digital pathology redefine medical imaging?Journal of pathology informatics · 2025Article
- Advancing open-source visual analytics in digital pathology: A systematic review of tools, trends, and clinical applications.Journal of pathology informatics · 2025Review
- Morphology-Aware Profiling of Highly Multiplexed Tissue Images using Variational Autoencoders.bioRxiv : the preprint server for biology · 2025Article
- Spatial integration of multi-omics data from serial sections using the novel Multi-Omics Imaging Integration Toolset.GigaScience · 2025Article
- Visualizing Volumetric and Segmentation Data using Mol* Volumes & Segmentations 2.0.Current protocols · 2024Article
- White matter hyperintensities and the surrounding normal appearing white matter are associated with water channel disruption in the oldest old.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2024Article
Corrections and comments
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Authors and funding
15 authors.
Funding
Abstract
Faced with the need to support a growing number of whole slide imaging (WSI) file formats, our team has extended a long-standing community file format (OME-TIFF) for use in digital pathology. The format makes use of the core TIFF specification to store multi-resolution (or "pyramidal") representations of a single slide in a flexible, performant manner. Here we describe the structure of this format, its performance characteristics, as well as an open-source library support for reading and writing pyramidal OME-TIFFs.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.