Evidence map›Paper›PMID 31578593›Full record

ArticleOncology reports2019

p53 deficiency augments nucleolar instability after ionizing irradiation.

Sangeeta Kakoti, Motohiro Yamauchi, Wenchao Gu, Reona Kato, Takaaki Yasuhara, Yoshihiko Hagiwara, Siddhartha Laskar, Takahiro Oike, Hiro Sato, Kathryn D Held and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Oncology reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Ribosomal DNA and Neurological Disorders.Current molecular medicine · 2025
    Review
  2. Article
  3. Value of carbon-ion radiotherapy for early stage non-small cell lung cancer.Clinical and translational radiation oncology · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

Sangeeta KakotiGunma University Initiative for Advanced Research (GIAR), Maebashi, Gunma 371‑8511, Japan.
Motohiro YamauchiDepartment of Radiation Biology and Protection, Atomic Bomb Disease Institute, Nagasaki University, Nagasaki 852‑8523, Japan.
Wenchao GuGunma University Initiative for Advanced Research (GIAR), Maebashi, Gunma 371‑8511, Japan.
Reona KatoLaboratory of Molecular Radiology, Center for Disease Biology and Integrative Medicine, Graduate School of Medicine, The University of Tokyo, Tokyo 113‑8655, Japan.
Takaaki YasuharaLaboratory of Molecular Radiology, Center for Disease Biology and Integrative Medicine, Graduate School of Medicine, The University of Tokyo, Tokyo 113‑8655, Japan.
Yoshihiko HagiwaraDepartment of Radiation Oncology, Gunma University Graduate School of Medicine, Maebashi, Gunma 371‑8511, Japan.
Siddhartha LaskarDepartment of Radiation Oncology, Tata Memorial Hospital, Mumbai 400012, India.
Takahiro OikeDepartment of Radiation Oncology, Gunma University Graduate School of Medicine, Maebashi, Gunma 371‑8511, Japan.
Hiro SatoDepartment of Radiation Oncology, Gunma University Graduate School of Medicine, Maebashi, Gunma 371‑8511, Japan.
Kathryn D HeldDepartment of Radiation Oncology, Massachusetts General Hospital/Harvard Medical School, Boston, MA 02114, USA.
Takashi NakanoDepartment of Radiation Oncology, Gunma University Graduate School of Medicine, Maebashi, Gunma 371‑8511, Japan.
Atsushi ShibataGunma University Initiative for Advanced Research (GIAR), Maebashi, Gunma 371‑8511, Japan.
Gunma University · JPThe University of Tokyo · JPHarvard University · USNagasaki University · JPTata Memorial Hospital · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ribosomes are important cellular components that maintain cellular homeostasis through overall protein synthesis. The nucleolus is a prominent subnuclear structure that contains ribosomal DNA (rDNA) encoding ribosomal RNA (rRNA), an essential component of ribosomes. Despite the significant role of the rDNA‑rRNA‑ribosome axis in cellular homeostasis, the stability of rDNA in the context of the DNA damage response has not been fully investigated. In the present study, the number and morphological changes of nucleolin, a marker of the nucleolus, were examined following ionizing radiation (IR) in order to investigate the impact of DNA damage on nucleolar stability. An increase in the number of nucleoli per cell was found in HCT116 and U2OS cells following IR. Interestingly, the IR‑dependent increase in nucleolar fragmentation was enhanced by p53 deficiency. In addition, the morphological analysis revealed several distinct types of nucleolar fragmentation following IR. The pattern of nucleolar morphology differed between HCT116 and U2OS cells, and the p53 deficiency altered the pattern of nucleolar morphology. Finally, a significant decrease in rRNA synthesis was observed in HCT116 p53‑/‑ cells following IR, suggesting that severe nucleolar fragmentation downregulates rRNA transcription. The findings of the present study suggest that p53 plays a key role in protecting the transcriptional activity of rDNA in response to DNA damage.

Indexed as

ApoptosisBone NeoplasmsCell NucleolusColorectal NeoplasmsDNA DamageDNA, RibosomalHumansNucleolinOsteosarcomaPhosphoproteinsRadiation, IonizingRNA-Binding ProteinsRNA, RibosomalTranscription, GeneticTumor Cells, CulturedTumor Suppressor Protein p53DNA, RibosomalNucleolinPhosphoproteinsRNA-Binding ProteinsRNA, RibosomalTP53 protein, humanTumor Suppressor Protein p53

Identifiers

PMID31578593
PMCPMC6826308
OpenAlexW2977221185

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.