Evidence map›Paper›PMID 31578580›Full record

ArticleOncology reports2019

Genetic interactions between ANLN and KDR are prognostic for breast cancer survival.

Xiaofeng Dai, Xiao Chen, Olivier Hakizimana, Yi Mei

Open access · hybridAbstract read
In one paragraph

Article in Oncology reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 36 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Xiaofeng DaiWuxi School of Medicine, Jiangnan University, Wuxi, Jiangsu 214122, P.R. China.
Xiao ChenSchool of Biotechnology, Jiangnan University, Wuxi, Jiangsu 214122, P.R. China.
Olivier HakizimanaSchool of Biotechnology, Jiangnan University, Wuxi, Jiangsu 214122, P.R. China.
Yi MeiSchool of Biotechnology, Jiangnan University, Wuxi, Jiangsu 214122, P.R. China.
Jiangnan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Single nucleotide polymorphisms (SNPs) are the most common genetic variation in mammalian cells with prognostic potential. Anillin‑actin binding protein (ANLN) has been identified as being involved in PI3K/PTEN signaling, which is critical in cell life/death control, and kinase insert domain receptor (KDR) encodes a key receptor mediating the cancer angiogenesis/metastasis switch. Knowledge of the intrinsic connections between PI3K/PTEN and KDR signaling, which represent two critical transitions in carcinogenesis, led the present study to investigate the effects of the potential synergy between ANLN and KDR on breast cancer outcome and identify relevant SNPs driving such a synergy at the genetic level. The survival associations of SNPs from KDR and ANLN were assessed through pairwise interaction survival analysis, quantitative trait loci analysis, pathway enrichment analysis and network construction, and the interactions between ANLN and KDR were validated in vitro. It was found that both rare homozygotes in the ANLN:rs12535394 and KDR:rs11133360 SNP pair are prognostic of favorable breast cancer survival and underpin the prominent roles of the immune response in cancer state control. This study contributes to breast cancer prognosis and therapeutic design by providing genetic evidence of interactions between ANLN and KDR, and suggesting the prominent role of the immune response in driving the synergies between the cancer cell life/death and angiogenesis/metastasis transitions during carcinogenesis.

Indexed as

Polymorphism, Single NucleotideApoptosisBiomarkers, TumorBreast NeoplasmsCell ProliferationFemaleGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansMicrofilament ProteinsNeovascularization, PathologicPrognosisSignal TransductionSurvival RateTumor Cells, CulturedVascular Endothelial Growth Factor Receptor-2ANLN protein, humanBiomarkers, TumorKDR protein, humanMicrofilament ProteinsVascular Endothelial Growth Factor Receptor-2

Identifiers

PMID31578580
PMCPMC6826306
OpenAlexW2975600790

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.