Evidence map›Paper›PMID 31578039›Full record

ArticlePediatric research2020

Short- and long-term impact of hyperoxia on the blood and retinal cells' transcriptome in a mouse model of oxygen-induced retinopathy.

Magdalena Zasada, Anna Madetko-Talowska, Cecilie Revhaug, Anne Gro W Rognlien, Lars O Baumbusch, Teofila Książek, Katarzyna Szewczyk, Agnieszka Grabowska, Miroslaw Bik-Multanowski, Jacek Józef Pietrzyk and 2 more

Open access · hybridAbstract readComparative Study
In one paragraph

Article in Pediatric research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Magdalena Zasada *Department of Paediatrics, Jagiellonian University Medical College, Krakow, Poland.
Anna Madetko-Talowska *Department of Medical Genetics, Jagiellonian University Medical College, Krakow, Poland.
Cecilie RevhaugDepartment of Paediatric Research, Oslo University Hospital Rikshospitalet, Oslo, Norway.
Anne Gro W RognlienDepartment of Paediatric Research, Oslo University Hospital Rikshospitalet, Oslo, Norway.
Lars O BaumbuschDepartment of Paediatric Research, Oslo University Hospital Rikshospitalet, Oslo, Norway.
Teofila KsiążekDepartment of Medical Genetics, Jagiellonian University Medical College, Krakow, Poland.
Katarzyna SzewczykDepartment of Medical Genetics, Jagiellonian University Medical College, Krakow, Poland.
Agnieszka GrabowskaDepartment of Medical Genetics, Jagiellonian University Medical College, Krakow, Poland.
Miroslaw Bik-MultanowskiDepartment of Medical Genetics, Jagiellonian University Medical College, Krakow, Poland.
Jacek Józef PietrzykDepartment of Paediatrics, Jagiellonian University Medical College, Krakow, Poland.
Przemko KwintaDepartment of Paediatrics, Jagiellonian University Medical College, Krakow, Poland. przemko.kwinta@uj.edu.pl.
Ola Didrik SaugstadDepartment of Paediatric Research, Oslo University Hospital Rikshospitalet, Oslo, Norway.
Jagiellonian University · PLOslo University Hospital · NOUniversity of Oslo · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWe aimed to identify global blood and retinal gene expression patterns in murine oxygen-induced retinopathy (OIR), a common model of retinopathy of prematurity, which may allow better understanding of the pathogenesis of this severe ocular prematurity complication and identification of potential blood biomarkers.

methodsA total of 120 C57BL/6J mice were randomly divided into an OIR group, in which 7-day-old pups were maintained in 75% oxygen for 5 days, or a control group. RNA was extracted from the whole-blood mononuclear cells and retinal cells on days 12, 17, and 28. Gene expression in the RNA samples was evaluated with mouse gene expression microarrays.

resultsThere were 38, 1370 and 111 genes, the expression of which differed between the OIR and control retinas on days 12, 17, and 28, respectively. Gene expression in the blood mononuclear cells was significantly altered only on day 17. Deptor and Nol4 genes showed reduced expression both in the blood and retinal cells on day 17.

conclusionThere are sustained marked changes in the global pattern of gene expression in the OIR mice retinas. An altered expression of Deptor and Nol4 genes in the blood mononuclear cells requires further investigation as they may indicate retinal neovascularization.

Indexed as

TranscriptomeAnimalsAnimals, NewbornDisease Models, AnimalGene Expression ProfilingHyperoxiaIntracellular Signaling Peptides and ProteinsLeukocytes, MononuclearMice, Inbred C57BLNuclear ProteinsRetinaRetinal NeovascularizationRetinopathy of PrematurityRNA, MessengerTime Factorsdeptor protein, mouseIntracellular Signaling Peptides and ProteinsNuclear ProteinsRNA, Messenger

Identifiers

PMID31578039
PMCPMC7033041
OpenAlexW2978700740

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.