Evidence map›Paper›PMID 31577852›Full record

ArticleThe journal of pathology. Clinical research2020

Longitudinal analysis of a secondary BRCA2 mutation using digital droplet PCR.

Saira Khalique, Stephen J Pettitt, Ger Kelly, Nina Tunariu, Rachael Natrajan, Susana Banerjee, Christopher J Lord

Abstract readCase Reports
In one paragraph

Article in The journal of pathology. Clinical research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Review
  3. Droplet Digital PCR Improves Detection ofInternational journal of molecular sciences · 2025
    Article
  4. Article
  5. Review
  6. ClinicalCancer discovery · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Saira KhaliqueDivision of Molecular Pathology, The Institute of Cancer Research, London, UK.
Stephen J PettittThe CRUK Gene Function Laboratory and Breast Cancer Now Research Centre, The Institute of Cancer Research, London, UK.ORCID 0000-0003-3313-3857
Ger KellyThe CRUK Gene Function Laboratory and Breast Cancer Now Research Centre, The Institute of Cancer Research, London, UK.
Nina TunariuThe Royal Marsden NHS Foundation Trust and The Institute of Cancer Research, Sutton, UK.
Rachael NatrajanDivision of Molecular Pathology, The Institute of Cancer Research, London, UK.ORCID 0000-0002-9987-2946
Susana BanerjeeThe Royal Marsden NHS Foundation Trust and The Institute of Cancer Research, Sutton, UK.
Christopher J LordThe CRUK Gene Function Laboratory and Breast Cancer Now Research Centre, The Institute of Cancer Research, London, UK.

Funding

Cancer Research UK 14276Cancer Research UK 24439Cancer Research UK C30061/A24439
6 · The paper itself

Abstract

Development of resistance to platinum and poly(ADP-ribose) polymerase inhibitors via secondary BRCA gene mutations that restore functional homologous recombination has been observed in a number of cancer types. Here we report a case of somatic BRCA2 mutation in a patient with high grade serous ovarian carcinoma. A secondary mutation predicted to restore the BRCA2 open reading frame was detected at low frequency (2.3%) in whole exome sequencing of a peritoneal biopsy at disease progression after treatment that included carboplatin and olaparib. We used digital droplet PCR (ddPCR) to verify the presence and frequency of this mutation in the biopsy sample at progression and also used this approach to assess the presence of the secondary mutation in preceding biopsies at diagnosis and first relapse. We found no evidence for the secondary mutation being present prior to the final progression biopsy, suggesting that this mutation was acquired late in the course of treatment. ddPCR provides a sensitive and specific technique to investigate the presence of low frequency mutations in a time series of biopsies.

Indexed as

Antineoplastic AgentsBRCA2 ProteinCarboplatinCystadenocarcinoma, SerousDrug Resistance, NeoplasmFemaleGerm-Line MutationHumansMiddle AgedNeoplasm Recurrence, LocalOvarian NeoplasmsPaclitaxelPhthalazinesPiperazinesPolymerase Chain ReactionAntineoplastic AgentsBRCA2 ProteinBRCA2 protein, humanCarboplatinolaparibPaclitaxelPhthalazinesPiperazinesBRCA2cancerdigital droplet PCRdrug resistancePARP inhibitor

Identifiers

PMID31577852
PMCPMC6966703

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.