Evidence map›Paper›PMID 31577799›Full record

ArticlePloS one2019

Bacterial diversity in Icelandic cold spring sources and in relation to the groundwater amphipod Crangonyx islandicus.

Ragnhildur Guðmundsdóttir, Agnes-Katharina Kreiling, Bjarni Kristófer Kristjánsson, Viggó Þór Marteinsson, Snæbjörn Pálsson

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In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Microbial ecology of shallow groundwater ecosystems.Nature reviews. Microbiology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Ragnhildur GuðmundsdóttirFaculty of Life and Environmental Sciences, University of Iceland, Reykjavík, Iceland.ORCID 0000-0003-0145-5122
Agnes-Katharina KreilingFaculty of Life and Environmental Sciences, University of Iceland, Reykjavík, Iceland.
Bjarni Kristófer KristjánssonDepartment of Aquaculture and Fish Biology, Hólar University, Sauðárkrókur, Iceland.
Viggó Þór MarteinssonMatis ohf./Icelandic Food and Biotech R&D, Reykjavík, Iceland.
Snæbjörn PálssonFaculty of Life and Environmental Sciences, University of Iceland, Reykjavík, Iceland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Crangonyx islandicus is a groundwater amphipod endemic to Iceland, considered to have survived the Ice Ages in subglacial refugia. Currently the species is found in spring sources in lava fields along the tectonic plate boundary of the country. The discovery of a groundwater species in this inaccessible habitat indicates a hidden ecosystem possibly based on chemoautotrophic microorganisms as primary producers. To explore this spring ecosystem, we assessed its microbial diversity and analysed whether and how the diversity varied between the amphipods and the spring water, and if was dependent on environmental factors and geological settings. Isolated DNA from spring water and from amphipods was analysed using metabarcoding methods, targeting the 16S rRNA gene. Two genera of bacteria, Halomonas and Shewanella were dominating in the amphipod samples in terms of relative abundance, but not in the groundwater samples where Flavobacterium, Pseudomonas and Alkanindiges among others were dominating. The richness of the bacteria taxa in the microbial community of the groundwater spring sources was shaped by pH level and the beta diversity was shaped by geographic locations.

Indexed as

BiodiversityAmphipodaAnimalsBacteriaGenetic VariationGeographyGroundwaterIcelandLinear ModelsMicrobiotaRNA, Ribosomal, 16SRNA, Ribosomal, 16S

Identifiers

PMID31577799
PMCPMC6774475

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.