Evidence map›Paper›PMID 31577424›Full record

ArticleACS infectious diseases2019

Determinants of Active-Site Inhibitor Interaction with HIV-1 RNase H.

Zhaoyong Xi, Zhengqiang Wang, Stefan G Sarafianos, Nataliya S Myshakina, Rieko Ishima

Open access · greenAbstract read
In one paragraph

Article in ACS infectious diseases, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Zhaoyong XiDepartment of Structural Biology , University of Pittsburgh School of Medicine , 3501 Fifth Avenue , Pittsburgh , Pennsylvania 15260 , United States.
Zhengqiang WangCenter for Drug Design, College of Pharmacy , University of Minnesota , 516 Delaware Street SE , PWB 7-215, MMC 204, Minneapolis , Minnesota 55455 , United States.ORCID 0000-0002-1326-5986
Stefan G SarafianosLaboratory of Biochemical Pharmacology, Department of Pediatrics , Emory University School of Medicine , Atlanta , Georgia 30322 , United States.ORCID 0000-0002-5840-154X
Nataliya S MyshakinaDepartment of Natural Science , Chatham University , Woodland Road , Pittsburgh , Pennsylvania 15232 , United States.
Rieko IshimaDepartment of Structural Biology , University of Pittsburgh School of Medicine , 3501 Fifth Avenue , Pittsburgh , Pennsylvania 15260 , United States.ORCID 0000-0002-3418-0922
University of Pittsburgh · USChatham University · USEmory University · USUniversity of Minnesota · US

Funding

Novel antivirals targeting the RNase H activity of HIV reverse transcriptaseR01AI100890 · NIAID · UNIVERSITY OF MISSOURI-COLUMBIA · PI SARAFIANOS, STEFAN G, WANG, ZHENGQIANG · 2012 to 2016
$3.6M
Conformational Dynamics and inhibitor responses of HIV-1 RT RNase H in solutionR01GM105401 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ISHIMA, RIEKO · 2013 to 2016
$1.4M
NIAID NIH HHS R01 AI100890NIGMS NIH HHS R01 GM105401
6 · The paper itself

Abstract

The ribonuclease H (RNH) activity of HIV-1 reverse transcriptase (RT) is essential for viral replication and can be a target for drug development. Yet, no RNH inhibitor to date has substantial antiviral activity to allow advancement into clinical development. Herein, we describe our characterization of the detailed binding mechanisms of RNH active-site inhibitors, YLC2-155 and ZW566, that bind to the RNH domain through divalent metal ions, using NMR, molecular docking, and quantum mechanical calculations. In the presence of Mg

Indexed as

Anti-HIV AgentsCatalytic DomainEnzyme InhibitorsHIV-1HIV InfectionsHumansIsoquinolinesMagnesiumModels, MolecularMolecular Docking SimulationRibonuclease H, Human Immunodeficiency VirusAnti-HIV AgentsEnzyme InhibitorsIsoquinolinesMagnesiumRibonuclease H, Human Immunodeficiency VirusYLC2-155HIVmolecular dockingNMRquantum mechanical calculationsRNase H

Identifiers

PMID31577424
PMCPMC6842066
OpenAlexW2978833582

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.