Evidence map›Paper›PMID 31576654›Full record

ArticleEMBO reports2019

ATF7IP regulates SETDB1 nuclear localization and increases its ubiquitination.

Takeshi Tsusaka, Chikako Shimura, Yoichi Shinkai

Open access · bronzeAbstract read
In one paragraph

Article in EMBO reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 78 citations in OpenAlex.

  1. Review
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  5. The Many Faces of SetDB1.Epigenomes · 2026
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors.

Takeshi TsusakaCellular Memory Laboratory, Cluster for Pioneering Research, RIKEN, Wako, Japan.
Chikako ShimuraCellular Memory Laboratory, Cluster for Pioneering Research, RIKEN, Wako, Japan.
Yoichi ShinkaiCellular Memory Laboratory, Cluster for Pioneering Research, RIKEN, Wako, Japan.ORCID 0000-0002-6051-2484

Funding

MEXT | Japan Society for the Promotion of Science (JSPS) 18H03991MEXT | Japan Society for the Promotion of Science (JSPS) 18H05530MEXT | RIKEN
6 · The paper itself

Abstract

Understanding of the appropriate regulation of enzymatic activities of histone-modifying enzymes remains poor. The lysine methyltransferase, SETDB1, is one of the enzymes responsible for the methylation of histone H3 at lysine 9 (H3K9) and plays a key role in H3K9 trimethylation-mediated silencing of genes and retrotransposons. Here, we reported that how SETDB1's enzymatic activities can be regulated by the nuclear protein, ATF7IP, a known binding partner of SETDB1. Mechanistically, ATF7IP mediates SETDB1 retention inside the nucleus, presumably by inhibiting its nuclear export by binding to the N-terminal region of SETDB1, which harbors the nuclear export signal motifs, and also by promoting its nuclear import. The nuclear localization of SETDB1 increases its ubiquitinated, enzymatically more active form. Our results provided an insight as to how ATF7IP can regulate the histone methyltransferase activity of SETDB1 accompanied by its nuclear translocation.

Indexed as

UbiquitinationActive Transport, Cell NucleusAnimalsBinding SitesCell NucleusCells, CulturedHEK293 CellsHistone-Lysine N-MethyltransferaseHumansMiceProtein BindingRepressor ProteinsATF7IP protein, humanHistone-Lysine N-MethyltransferaseRepressor ProteinsSETDB1 protein, mouseATF7IPhistone lysine methylationnuclear localizationSETDB1ubiquitination

Identifiers

PMID31576654
PMCPMC6893292
OpenAlexW2979029763

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.