Evidence map›Paper›PMID 31575946›Full record

ArticleScientific reports2019

Head and Neck Cancer Detection in Digitized Whole-Slide Histology Using Convolutional Neural Networks.

Martin Halicek, Maysam Shahedi, James V Little, Amy Y Chen, Larry L Myers, Baran D Sumer, Baowei Fei

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 115 citations in OpenAlex.

  1. Review
  2. Classification of esophageal cancer by using hyperspectral data.International journal of computer assisted radiology and surgery · 2026
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  9. An automatic processing framework for hyperspectral histologic images and benchmark dataset.Proceedings of SPIE--the International Society for Optical Engineering · 2025
    Article
  10. Article
  11. Review
  12. Article
  13. Artificial Intelligence in Head and Neck Surgery.Otolaryngologic clinics of North America · 2024
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. An Overview of Advances in Rare Cancer Diagnosis and Treatment.International journal of molecular sciences · 2024
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Martin HalicekDepartment of Bioengineering, University of Texas at Dallas, Richardson, TX, USA.ORCID http://orcid.org/0000-0001-7894-8625
Maysam ShahediDepartment of Bioengineering, University of Texas at Dallas, Richardson, TX, USA.
James V LittleDepartment of Pathology and Laboratory Medicine, Emory University School of Medicine, Atlanta, GA, USA.
Amy Y ChenDepartment of Otolaryngology, Emory University School of Medicine, Atlanta, GA, USA.
Larry L MyersDepartment of Otolaryngology, University of Texas Southwestern Medical Center, Dallas, TX, USA.
Baran D SumerDepartment of Otolaryngology, University of Texas Southwestern Medical Center, Dallas, TX, USA.ORCID http://orcid.org/0000-0002-8371-4388
Baowei FeiDepartment of Bioengineering, University of Texas at Dallas, Richardson, TX, USA. bfei@utdallas.edu.ORCID http://orcid.org/0000-0002-9123-9484
Emory University · USThe University of Texas at Dallas · USThe University of Texas Southwestern Medical Center · USGeorgia Institute of Technology · US

Funding

Image-guided Intravascular Robotic System for Mitral Valve Repair and ImplantsR01HL140325 · NHLBI · GEORGIA INSTITUTE OF TECHNOLOGY · PI DESAI, JAYDEV P., FEI, BAOWEI · 2018 to 2021
$3.0M
ACADEMIC-INDUSTRIAL PARTNERSHIP FOR TRANSLATION OF PET/TRUS GUIDED INTERVENTIONR01CA204254 · NCI · UNIVERSITY OF TEXAS DALLAS · PI FEI, BAOWEI · 2017 to 2021
$2.0M
MOLECULAR IMAGING DIRECTED, 3D ULTRASOUND-GUIDED, BIOPSY SYSTEMR01CA156775 · NCI · UNIVERSITY OF TEXAS DALLAS · PI FEI, BAOWEI · 2011 to 2016
$1.7M
STAN-CT: Standardization and Normalization of CT images for Lung Cancer PatientsR21CA231911 · NCI · UNIVERSITY OF KENTUCKY · PI CHEN, JIN, FEI, BAOWEI · 2019 to 2020
$389k
NCI NIH HHS R01 CA156775NCI NIH HHS R01 CA204254NCI NIH HHS R21 CA231911NHLBI NIH HHS R01 HL140325
6 · The paper itself

Abstract

Primary management for head and neck cancers, including squamous cell carcinoma (SCC), involves surgical resection with negative cancer margins. Pathologists guide surgeons during these operations by detecting cancer in histology slides made from the excised tissue. In this study, 381 digitized, histological whole-slide images (WSI) from 156 patients with head and neck cancer were used to train, validate, and test an inception-v4 convolutional neural network. The proposed method is able to detect and localize primary head and neck SCC on WSI with an AUC of 0.916 for patients in the SCC testing group and 0.954 for patients in the thyroid carcinoma testing group. Moreover, the proposed method is able to diagnose WSI with cancer versus normal slides with an AUC of 0.944 and 0.995 for the SCC and thyroid carcinoma testing groups, respectively. For comparison, we tested the proposed, diagnostic method on an open-source dataset of WSI from sentinel lymph nodes with breast cancer metastases, CAMELYON 2016, to obtain patch-based cancer localization and slide-level cancer diagnoses. The experimental design yields a robust method with potential to help create a tool to increase efficiency and accuracy of pathologists detecting head and neck cancers in histological images.

Indexed as

Breast NeoplasmsCarcinoma, Squamous CellDatasets as TopicFemaleHead and Neck NeoplasmsHumansImage Interpretation, Computer-AssistedLymphatic MetastasisNeural Networks, ComputerReproducibility of ResultsSensitivity and SpecificitySpecimen HandlingThyroid Neoplasms

Identifiers

PMID31575946
PMCPMC6773771
OpenAlexW2977899280

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.