Evidence map›Paper›PMID 31573896›Full record

ArticleJMIR cancer2019

Developing Machine Learning Algorithms for the Prediction of Early Death in Elderly Cancer Patients: Usability Study.

Gabrielle Ribeiro Sena, Tiago Pessoa Ferreira Lima, Maria Julia Gonçalves Mello, Luiz Claudio Santos Thuler, Jurema Telles Oliveira Lima

Abstract read
In one paragraph

Article in JMIR cancer, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
  6. Survivorship Care of Older Adults With Cancer: Priority Areas for Clinical Practice, Training, Research, and Policy.Journal of clinical oncology : official journal of the American Society of Clinical Oncology · 2021
    Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Gabrielle Ribeiro Sena *Department of Geriatric Oncology, Instituto de Medicina Integral Prof Fernando Figueira, Recife, Brazil.ORCID https://orcid.org/0000-0002-8430-3599
Tiago Pessoa Ferreira Lima *Department of Geriatric Oncology, Instituto de Medicina Integral Prof Fernando Figueira, Recife, Brazil.ORCID https://orcid.org/0000-0002-1148-4288
Maria Julia Gonçalves Mello *Department of Geriatric Oncology, Instituto de Medicina Integral Prof Fernando Figueira, Recife, Brazil.ORCID https://orcid.org/0000-0003-4645-8343
Luiz Claudio Santos Thuler *Research Center, Instituto Nacional do Cancer - INCA, Rio de Janeiro, Brazil.ORCID https://orcid.org/0000-0003-2550-6537
Jurema Telles Oliveira Lima *Department of Geriatric Oncology, Instituto de Medicina Integral Prof Fernando Figueira, Recife, Brazil.ORCID https://orcid.org/0000-0002-8607-1584

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe importance of classifying cancer patients into high- or low-risk groups has led many research teams, from the biomedical and bioinformatics fields, to study the application of machine learning (ML) algorithms. The International Society of Geriatric Oncology recommends the use of the comprehensive geriatric assessment (CGA), a multidisciplinary tool to evaluate health domains, for the follow-up of elderly cancer patients. However, no applications of ML have been proposed using CGA to classify elderly cancer patients.

objectiveThe aim of this study was to propose and develop predictive models, using ML and CGA, to estimate the risk of early death in elderly cancer patients.

methodsThe ability of ML algorithms to predict early mortality in a cohort involving 608 elderly cancer patients was evaluated. The CGA was conducted during admission by a multidisciplinary team and included the following questionnaires: mini-mental state examination (MMSE), geriatric depression scale-short form, international physical activity questionnaire-short form, timed up and go, Katz index of independence in activities of daily living, Charlson comorbidity index, Karnofsky performance scale (KPS), polypharmacy, and mini nutritional assessment-short form (MNA-SF). The 10-fold cross-validation algorithm was used to evaluate all possible combinations of these questionnaires to estimate the risk of early death, considered when occurring within 6 months of diagnosis, in a variety of ML classifiers, including Naive Bayes (NB), decision tree algorithm J48 (J48), and multilayer perceptron (MLP). On each fold of evaluation, tiebreaking is handled by choosing the smallest set of questionnaires.

resultsIt was possible to select CGA questionnaire subsets with high predictive capacity for early death, which were either statistically similar (NB) or higher (J48 and MLP) when compared with the use of all questionnaires investigated. These results show that CGA questionnaire selection can improve accuracy rates and decrease the time spent to evaluate elderly cancer patients.

conclusionsA simplified predictive model aiming to estimate the risk of early death in elderly cancer patients is proposed herein, minimally composed by the MNA-SF and KPS. We strongly recommend that these questionnaires be incorporated into regular geriatric assessment of older patients with cancer.

Indexed as

ageddeathgeriatric assessmentmachine learningmedical oncology

Identifiers

PMID31573896
PMCPMC6787529

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.