Evidence map›Paper›PMID 31573512›Full record

ArticleeLife2019

Adaptation to mutational inactivation of an essential gene converges to an accessible suboptimal fitness peak.

João V Rodrigues, Eugene I Shakhnovich

Open access · goldAbstract read
In one paragraph

Article in eLife, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 46 citations in OpenAlex.

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  8. In vivo functional phenotypes from a computational epistatic model of evolution.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  9. Article
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  11. Evolution avoids a pathological stabilizing interaction in the immune protein S100A9.Proceedings of the National Academy of Sciences of the United States of America · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

João V RodriguesDepartment of Chemistry and Chemical Biology, Harvard University, Cambridge, United States.ORCID 0000-0002-5605-656X
Eugene I ShakhnovichDepartment of Chemistry and Chemical Biology, Harvard University, Cambridge, United States.ORCID 0000-0002-4769-2265
Harvard University · US

Funding

Study of Biological Evolution of Structure and Function in ProteinsR01GM068670 · NIGMS · HARVARD UNIVERSITY · PI SHAKHNOVICH, EUGENE I · 2004 to 2020
$7.0M
NIGMS NIH HHS 068670NIGMS NIH HHS R01 GM068670
6 · The paper itself

Abstract

The mechanisms of adaptation to inactivation of essential genes remain unknown. Here we inactivate

Indexed as

Adaptation, BiologicalGenes, EssentialEscherichia coliEvolution, MolecularMetabolomeMutation, MissenseProteomeSerial PassageTetrahydrofolate DehydrogenaseProteomeTetrahydrofolate Dehydrogenaseantibiotic resistancecomputational biologyDHFRE. colievolutionary biologyfitness landscapemetabolomicsprotein evolutionproteomicssystems biology

Identifiers

PMID31573512
PMCPMC6828540
OpenAlexW2978837790

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.