Evidence map›Paper›PMID 31573059›Full record

ArticleVirus genes2019

Field vole-associated Traemmersee hantavirus from Germany represents a novel hantavirus species.

Kathrin Jeske, Melanie Hiltbrunner, Stephan Drewes, René Ryll, Matthias Wenk, Aliona Špakova, Rasa Petraitytė-Burneikienė, Gerald Heckel, Rainer G Ulrich

Abstract read
PubMed Publisher
In one paragraph

Article in Virus genes, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. [Viral zoonoses in Germany: a One Health perspective].Bundesgesundheitsblatt, Gesundheitsforschung, Gesundheitsschutz · 2023
    Review
  4. Article
  5. Article
  6. Genetic Diversity ofViruses · 2021
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Kathrin JeskeFriedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Institute of Novel and Emerging Infectious Diseases, Südufer 10, 17493, Greifswald-Insel Riems, Germany.
Melanie HiltbrunnerInstitute of Ecology and Evolution, University of Bern, Baltzerstrasse 6, 3012, Bern, Switzerland.
Stephan DrewesFriedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Institute of Novel and Emerging Infectious Diseases, Südufer 10, 17493, Greifswald-Insel Riems, Germany.
René RyllFriedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Institute of Novel and Emerging Infectious Diseases, Südufer 10, 17493, Greifswald-Insel Riems, Germany.
Matthias WenkLandesbetrieb Forst Brandenburg, Fachbereich 4.3 Waldschutz, A.-Möller-Str. 1, 16225, Eberswalde, Germany.
Aliona ŠpakovaInstitute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio al. 7, 10257, Vilnius, Lithuania.
Rasa Petraitytė-BurneikienėInstitute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio al. 7, 10257, Vilnius, Lithuania.
Gerald HeckelInstitute of Ecology and Evolution, University of Bern, Baltzerstrasse 6, 3012, Bern, Switzerland.
Rainer G UlrichFriedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Institute of Novel and Emerging Infectious Diseases, Südufer 10, 17493, Greifswald-Insel Riems, Germany. rainer.ulrich@fli.de.
Friedrich-Loeffler-Institut · DEUniversity of Bern · CHVilnius University · LT

Funding

Federal Environment Agency 3714 67 407 0Swiss National Science Foundation 31003A_176209
6 · The paper itself

Abstract

Vole-associated hantaviruses occur in the Old and New World. Tula orthohantavirus (TULV) is widely distributed throughout the European continent in its reservoir, the common vole (Microtus arvalis), but the virus was also frequently detected in field voles (Microtus agrestis) and other vole species. TULV and common voles are absent from Great Britain. However, field voles there harbor Tatenale and Kielder hantaviruses. Here we screened 126 field voles and 13 common voles from Brandenburg, Germany, for hantavirus infections. One common vole and four field voles were anti-TULV antibody and/or TULV RNA positive. In one additional, seropositive field vole a novel hantavirus sequence was detected. The partial S and L segment nucleotide sequences were only 61.1% and 75.6% identical to sympatrically occurring TULV sequences, but showed highest similarity of approximately 80% to British Tatenale and Kielder hantaviruses. Subsequent determination of the entire nucleocapsid (N), glycoprotein (GPC), and RNA-dependent RNA polymerase encoding sequences and determination of the pairwise evolutionary distance (PED) value for the concatenated N and GPC amino acid sequences confirmed a novel orthohantavirus species, tentatively named Traemmersee orthohantavirus. The identification of this novel hantavirus in a field vole from eastern Germany underlines the necessity of a large-scale, broad geographical hantavirus screening of voles to understand evolutionary processes of virus-host associations and host switches.

Indexed as

Amino Acid SequenceAnimalsArvicolinaeGermanyHantavirus InfectionsHost SpecificityHumansNucleocapsidOrthohantavirusPhylogenyRNA, ViralRNA VirusesRodent DiseasesRNA, ViralField voleGermanyHantavirus speciesMicrotus agrestisTatenaleTula orthohantavirus

Identifiers

PMID31573059
OpenAlexW2977414982

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.