Evidence map›Paper›PMID 31572723›Full record

ArticleFrontiers in cell and developmental biology2019

Gene Co-expression Analysis Identifies Histone Deacetylase 5 and 9 Expression in Midbrain Dopamine Neurons and as Regulators of Neurite Growth via Bone Morphogenetic Protein Signaling.

Martina Mazzocchi, Sean L Wyatt, Daniela Mercatelli, Michele Morari, Noelia Morales-Prieto, Louise M Collins, Aideen M Sullivan, Gerard W O'Keeffe

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cell and developmental biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Martina MazzocchiDepartment of Anatomy & Neuroscience, University College Cork (UCC), Cork, Ireland.
Sean L WyattSchool of Biosciences, Cardiff University, Cardiff, United Kingdom.
Daniela MercatelliDepartment of Medical Sciences, Section of Pharmacology, University of Ferrara, National Institute of Neuroscience, Ferrara, Italy.
Michele MorariDepartment of Medical Sciences, Section of Pharmacology, University of Ferrara, National Institute of Neuroscience, Ferrara, Italy.
Noelia Morales-PrietoDepartment of Anatomy & Neuroscience, University College Cork (UCC), Cork, Ireland.
Louise M CollinsDepartment of Anatomy & Neuroscience, University College Cork (UCC), Cork, Ireland.
Aideen M SullivanDepartment of Anatomy & Neuroscience, University College Cork (UCC), Cork, Ireland.
Gerard W O'KeeffeDepartment of Anatomy & Neuroscience, University College Cork (UCC), Cork, Ireland.
University College Cork · IEUniversity of Ferrara · ITAPC Microbiome Institute · IECardiff University · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Parkinson's disease is characterized by the intracellular accumulation of α-synuclein which has been linked to early dopaminergic axonal degeneration. Identifying druggable targets that can promote axonal growth in cells overexpressing α-synuclein is important in order to develop strategies for early intervention. Class-IIa histone deacetylases (HDACs) have previously emerged as druggable targets, however, it is not known which specific class-IIa HDACs should be targeted to promote neurite growth in dopaminergic neurons. To provide insight into this, we used gene co-expression analysis to identify which, if any, of the class-IIa HDACs had a positive correlation with markers of dopaminergic neurons in the human substantia nigra. This revealed that two histone deacetylases,

Indexed as

alpha-synucleinbone morphogenetic proteindegenerationhistone deacetylaseneurite growthParkinson’sSmadsurvival

Identifiers

PMID31572723
PMCPMC6753186
OpenAlexW2970359225

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.