Evidence map›Paper›PMID 31570974›Full record

ArticlePlant cell reports2020

QTL-seq reveals genomic regions associated with spikelet fertility in response to a high temperature in rice (Oryza sativa L.).

Phakchana Nubankoh, Samart Wanchana, Chatree Saensuk, Vinitchan Ruanjaichon, Sulaiman Cheabu, Apichart Vanavichit, Theerayut Toojinda, Chanate Malumpong, Siwaret Arikit

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Article in Plant cell reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Review
  2. Advances in mutant characterization for detecting causal mutations in crop plants.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
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  14. Advances on the Study of Diurnal Flower-Opening Times of Rice.International journal of molecular sciences · 2023
    Review
  15. Article
  16. Genetic Research Progress: Heat Tolerance in Rice.International journal of molecular sciences · 2023
    Review
  17. Review
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  19. Global identification and integrated analysis of heat-responsive long non-coding RNAs in contrasting rice cultivars.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  20. Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

9 authors.

Phakchana NubankohFaculty of Agriculture at Kamphaeng Saen, Kasetsart University Kamphaeng Saen Campus, Nakhon Pathom, 73140, Thailand.
Samart WanchanaNational Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), Khlong Luang, Pathum Thani, 12120, Thailand.
Chatree SaensukRice Science Center, Kasetsart University Kamphaeng Saen Campus, Nakhon Pathom, 73140, Thailand.
Vinitchan RuanjaichonNational Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), Khlong Luang, Pathum Thani, 12120, Thailand.
Sulaiman CheabuFaculty of Agriculture, Princess of Naradhiwas University, Naradhiwas, 96000, Thailand.
Apichart VanavichitRice Science Center, Kasetsart University Kamphaeng Saen Campus, Nakhon Pathom, 73140, Thailand.
Theerayut ToojindaNational Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), Khlong Luang, Pathum Thani, 12120, Thailand.
Chanate MalumpongDepartment of Agronomy, Faculty of Agriculture at Kamphaeng Saen, Kasetsart University Kamphaeng Saen Campus, Nakhon Pathom, 73140, Thailand.
Siwaret ArikitRice Science Center, Kasetsart University Kamphaeng Saen Campus, Nakhon Pathom, 73140, Thailand. arikit@gmail.com.ORCID http://orcid.org/0000-0002-2964-1886

Funding

Agricultural Research Development Agency PRP5905021150
6 · The paper itself

Abstract

key messageThe QTL-seq approach was used to identify QTLs for spikelet fertility under heat stress in rice. QTLs were detected on chromosomes 1, 2 and 3. Rice is a staple food of more than half of the global population. Rice production is increasingly affected by extreme environmental fluctuations caused by climate change. Increasing temperatures that exceed the optimum temperature adversely affect rice growth and development, especially during reproductive stages. Heat stress during the reproductive stages has a large effect on spikelet fertility; hence, the yield decreases. To sustain rice yields under increasing temperatures, the development of rice varieties for heat tolerance is necessary. In this study, we applied the QTL-seq approach to rapidly identify QTLs for spikelet fertility under heat stress (air temperature of 40-45 °C) based on two DNA pools, each consisting of 25 individual plants that exhibited a heat-tolerant or heat-sensitive phenotype from an F

Indexed as

Chromosome MappingFertilityFlowersGenomicsHot TemperatureOryzaPhenotypePolymorphism, Single NucleotideQuantitative Trait LociStress, PhysiologicalThermotoleranceWhole Genome SequencingBulk-segregant analysisHeat toleranceQTL-seqRice

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.