Evidence map›Paper›PMID 31570608›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

Inherent reactivity of unselected TCR repertoires to peptide-MHC molecules.

S Harsha Krovi, John W Kappler, Philippa Marrack, Laurent Gapin

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Review
  3. Tracking the role of Aire in immune tolerance to the eye with a TCR transgenic mouse model.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. T-cell virtuosity in ''knowing thyself".Frontiers in immunology · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. MHC Restriction: Where Are We Now?Viral immunology · 2020
    Article
  12. Article
  13. Article
  14. T cell antigen recognition: Evolution-driven affinities.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

S Harsha KroviDepartment of Immunology and Microbiology, University of Colorado School of Medicine, Aurora, CO 80045.
John W KapplerDepartment of Immunology and Microbiology, University of Colorado School of Medicine, Aurora, CO 80045.
Philippa MarrackDepartment of Immunology and Microbiology, University of Colorado School of Medicine, Aurora, CO 80045; marrackp@njhealth.org Laurent.gapin@CUAnschutz.edu.
Laurent GapinDepartment of Immunology and Microbiology, University of Colorado School of Medicine, Aurora, CO 80045; marrackp@njhealth.org Laurent.gapin@CUAnschutz.edu.
University of Colorado Denver · USNational Jewish Health · US

Funding

University of Colorado Cancer Center Support Grant - Lung Cancer Patient-Derived Xenografts with Autologous Human Immune SystemsP30CA046934 · NCI · UNIVERSITY OF COLORADO DENVER · PI James V Degregori · 1988 to 2026
$117.0M
The Effects of MHCI Heterozygosity on T Cell Receptor RepertoiresR21AI135374 · NIAID · NATIONAL JEWISH HEALTH · PI MARRACK, PHILIPPA C. · 2018 to 2019
$458k
NCI NIH HHS P30 CA046934NIAID NIH HHS R21 AI135374
6 · The paper itself

Abstract

The repertoire of αβ T cell antigen receptors (TCRs) on mature T cells is selected in the thymus where it is rendered both self-tolerant and restricted to the recognition of major histocompatibility complex molecules presenting peptide antigens (pMHC). It remains unclear whether germline TCR sequences exhibit an inherent bias to interact with pMHC prior to selection. Here, we isolated TCR libraries from unselected thymocytes and upon reexpression of these random TCR repertoires in recipient T cell hybridomas, interrogated their reactivities to antigen-presenting cell lines. While these random TCR combinations could potentially have reacted with any surface molecule on the cell lines, the hybridomas were stimulated most frequently by pMHC ligands. The nature and CDR3 loop composition of the TCRβ chain played a dominant role in determining pMHC-reactivity. Replacing the germline regions of mouse TCRβ chains with those of other jawed vertebrates preserved reactivity to mouse pMHC. Finally, introducing the CD4 coreceptor into the hybridomas increased the proportion of cells that could respond to pMHC ligands. Thus, αβ TCRs display an intrinsic and evolutionary conserved bias for pMHC molecules in the absence of any selective pressure, which is further strengthened in the presence of coreceptors.

Indexed as

Evolution, MolecularAmino Acid MotifsAnimalsCell LineCells, CulturedHistocompatibility AntigensMiceMice, Inbred BALB CMice, Inbred C57BLProtein BindingReceptors, Antigen, T-Cell, alpha-betaSelection, GeneticHistocompatibility AntigensReceptors, Antigen, T-Cell, alpha-betamajor histocompatibility complexT cell antigen receptorT cell selection

Identifiers

PMID31570608
PMCPMC6825295
OpenAlexW2979247538

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.