Evidence map›Paper›PMID 31570496›Full record

ArticleThe Journal of experimental medicine2020

c-Maf regulates the plasticity of group 3 innate lymphoid cells by restraining the type 1 program.

Morgan E Parker, Alejandro Barrera, Joshua D Wheaton, Matthew K Zuberbuehler, David S J Allan, James R Carlyle, Timothy E Reddy, Maria Ciofani

Open access · greenAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 73 citations in OpenAlex.

  1. Trial
  2. Article
  3. Enhancer hubs govern chromatin topology and Th17 cell identity.bioRxiv : the preprint server for biology · 2026
    Article
  4. Article
  5. Review
  6. Article
  7. RORγtNature communications · 2026
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Review
  16. Review
  17. Restriction of innate Tγδ17 cell plasticity by an AP-1 regulatory axis.bioRxiv : the preprint server for biology · 2024
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Morgan E ParkerDepartment of Immunology, Duke University Medical Center, Durham, NC.
Alejandro BarreraCenter for Genomic and Computational Biology, Duke University Medical School, Durham, NC.
Joshua D WheatonDepartment of Immunology, Duke University Medical Center, Durham, NC.
Matthew K ZuberbuehlerDepartment of Immunology, Duke University Medical Center, Durham, NC.
David S J AllanDepartment of Immunology, University of Toronto, Toronto, Canada.
James R CarlyleDepartment of Immunology, University of Toronto, Toronto, Canada.
Timothy E ReddyCenter for Genomic and Computational Biology, Duke University Medical School, Durham, NC.
Maria CiofaniDepartment of Immunology, Duke University Medical Center, Durham, NC.
Duke Medical Center · USDuke University · USUniversity of Toronto · CA

Funding

Regulatory Mechanisms of CD4+ T Cell DifferentiationUM1HG009428 · NHGRI · DUKE UNIVERSITY · PI CIOFANI, MARIA, CRAWFORD, GREGORY E · 2017 to 2021
$4.6M
Basic Immunology Training ProgramT32AI052077 · NIAID · DUKE UNIVERSITY · PI KRANGEL, MICHAEL S · 2002 to 2024
$4.2M
The role of AP-1 family transcription factor networks in regulating TH17 cell effector identityR01GM115474 · NIGMS · DUKE UNIVERSITY · PI CIOFANI, MARIA · 2016 to 2024
$3.2M
University Training Program in Biomolecular and Tissue EngineeringT32GM144291 · NIGMS · DUKE UNIVERSITY · PI Charles A. Gersbach, Tatiana Segura · 2022 to 2026
$2.6M
NHGRI NIH HHS UM1 HG009428NIAID NIH HHS T32 AI052077NIGMS NIH HHS R01 GM115474NIGMS NIH HHS T32 GM144291
6 · The paper itself

Abstract

CCR6- group 3 innate lymphoid cells (ILC3s) are mediators of intestinal immunity and barrier function that possess the capacity to acquire type 1 effector features and fully convert into ILC1s. The molecular mechanisms governing such plasticity are undefined. Here, we identified c-Maf as an essential regulator of ILC3 homeostasis and plasticity that limits physiological ILC1 conversion. Phenotypic analysis of effector status in Maf-deficient CCR6- ILC3s, coupled with evaluation of global changes in transcriptome, chromatin accessibility, and transcription factor motif enrichment, revealed that c-Maf enforces ILC3 identity. c-Maf promoted ILC3 accessibility and supported RORγt activity and expression of type 3 effector genes. Conversely, c-Maf antagonized type 1 programming, largely through restraint of T-bet expression and function. Mapping of the dynamic changes in chromatin landscape accompanying CCR6- ILC3 development and ILC1 conversion solidified c-Maf as a gatekeeper of type 1 regulatory transformation and a controller of ILC3 fate.

Indexed as

AnimalsCell LineageChromatinGene Expression RegulationHomeostasisImmunity, InnateLymphocytesMiceMice, Inbred C57BLNuclear Receptor Subfamily 1, Group F, Member 3Proto-Oncogene Proteins c-mafTranscription FactorsTranscriptomeChromatinMaf protein, mouseNuclear Receptor Subfamily 1, Group F, Member 3Proto-Oncogene Proteins c-mafTranscription Factors

Identifiers

PMID31570496
PMCPMC7037249
OpenAlexW2995177489

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.