Evidence map›Paper›PMID 31569720›Full record

ArticleCancers2019

A Network Analysis of Multiple Myeloma Related Gene Signatures.

Yu Liu, Haocheng Yu, Seungyeul Yoo, Eunjee Lee, Alessandro Laganà, Samir Parekh, Eric E Schadt, Li Wang, Jun Zhu

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 31 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. The case for AI-driven cancer clinical trials - The efficacy arm in silico.Biochimica et biophysica acta. Reviews on cancer · 2021
    Review
  6. Article
  7. Article
  8. Article
  9. Gene expression profiling as a prognostic tool in multiple myeloma.Cancer drug resistance (Alhambra, Calif.) · 2021
    Review
  10. Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Yu LiuSema4, a Mount Sinai Venture, 333 Ludlow St., Stamford, CT 06902, USA.
Haocheng YuSema4, a Mount Sinai Venture, 333 Ludlow St., Stamford, CT 06902, USA.
Seungyeul YooDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Pl, New York, NY 10029, USA.ORCID 0000-0001-5616-2293
Eunjee LeeSema4, a Mount Sinai Venture, 333 Ludlow St., Stamford, CT 06902, USA.
Alessandro LaganàThe Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Pl, New York, NY 10029, USA.
Samir ParekhThe Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Pl, New York, NY 10029, USA.
Eric E SchadtSema4, a Mount Sinai Venture, 333 Ludlow St., Stamford, CT 06902, USA.
Li WangSema4, a Mount Sinai Venture, 333 Ludlow St., Stamford, CT 06902, USA.
Jun ZhuSema4, a Mount Sinai Venture, 333 Ludlow St., Stamford, CT 06902, USA. jun.zhu@mssm.edu.ORCID 0000-0003-0834-8178
Sema4 (United States) · USIcahn School of Medicine at Mount Sinai · US

Funding

Developing methods for curating multi-omics dataU01HG008451 · NHGRI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI ZHU, JUN · 2015 to 2017
$1.5M
NIH HHS U01 HG008451
6 · The paper itself

Abstract

Multiple myeloma (MM) is the second most prevalent hematological cancer. MM is a complex and heterogeneous disease, and thus, it is essential to leverage omics data from large MM cohorts to understand the molecular mechanisms underlying MM tumorigenesis, progression, and drug responses, which may aid in the development of better treatments. In this study, we analyzed gene expression, copy number variation, and clinical data from the Multiple Myeloma Research Consortium (MMRC) dataset and constructed a multiple myeloma molecular causal network (M3CN). The M3CN was used to unify eight prognostic gene signatures in the literature that shared very few genes between them, resulting in a prognostic subnetwork of the M3CN, consisting of 178 genes that were enriched for genes involved in cell cycle (fold enrichment = 8.4,

Indexed as

Bayesian networkgene signaturemultiple myelomaprognostictreatment response

Identifiers

PMID31569720
PMCPMC6827160
OpenAlexW2975867837

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.