Evidence map›Paper›PMID 31568707›Full record

ArticleMolecular genetics & genomic medicine2020

Breakpoint delineation in 5p- patients leads to new insights about microcephaly and the typical high-pitched cry.

Samar N Chehimi, Évelin A Zanardo, José R M Ceroni, Amom M Nascimento, Fabrícia A R Madia, Alexandre T Dias, Gil M N Filho, Marília M Montenegro, Jullian Damasceno, Thaís V M M Costa and 3 more

Open access · goldAbstract read
In one paragraph

Article in Molecular genetics & genomic medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Samar N ChehimiLaboratório de Citogenômica, Departamento de Patologia, Faculdade de Medicina FMUSP, Universidade de São Paulo, São Paulo, SP, Brazil.ORCID 0000-0002-0701-9260
Évelin A ZanardoLaboratório de Citogenômica, Departamento de Patologia, Faculdade de Medicina FMUSP, Universidade de São Paulo, São Paulo, SP, Brazil.ORCID 0000-0002-5624-8158
José R M CeroniUnidade de Genética, Departamento de Pediatria, Instituto da Criança, Hospital das Clinicas HCFMUSP, Faculdade de Medicina, Universidade de São Paulo, São Paulo, SP, Brazil.ORCID 0000-0001-6192-5339
Amom M NascimentoLaboratório de Citogenômica, Departamento de Patologia, Faculdade de Medicina FMUSP, Universidade de São Paulo, São Paulo, SP, Brazil.ORCID 0000-0002-7553-8337
Fabrícia A R MadiaLaboratório de Citogenômica, Departamento de Patologia, Faculdade de Medicina FMUSP, Universidade de São Paulo, São Paulo, SP, Brazil.ORCID 0000-0002-8389-0509
Alexandre T DiasLaboratório de Citogenômica, Departamento de Patologia, Faculdade de Medicina FMUSP, Universidade de São Paulo, São Paulo, SP, Brazil.ORCID 0000-0001-9173-789X
Gil M N FilhoLaboratório de Citogenômica, Departamento de Patologia, Faculdade de Medicina FMUSP, Universidade de São Paulo, São Paulo, SP, Brazil.ORCID 0000-0002-6615-1421
Marília M MontenegroLaboratório de Citogenômica, Departamento de Patologia, Faculdade de Medicina FMUSP, Universidade de São Paulo, São Paulo, SP, Brazil.ORCID 0000-0003-3833-7234
Jullian DamascenoLaboratório de Citogenômica, Departamento de Patologia, Faculdade de Medicina FMUSP, Universidade de São Paulo, São Paulo, SP, Brazil.ORCID 0000-0002-5921-9459
Thaís V M M CostaLaboratório de Citogenômica, Departamento de Patologia, Faculdade de Medicina FMUSP, Universidade de São Paulo, São Paulo, SP, Brazil.ORCID 0000-0001-9751-9869
Yanca GaspariniLaboratório de Citogenômica, Departamento de Patologia, Faculdade de Medicina FMUSP, Universidade de São Paulo, São Paulo, SP, Brazil.ORCID 0000-0002-7035-7705
Chong A KimUnidade de Genética, Departamento de Pediatria, Instituto da Criança, Hospital das Clinicas HCFMUSP, Faculdade de Medicina, Universidade de São Paulo, São Paulo, SP, Brazil.ORCID 0000-0002-1754-1300
Leslie D KulikowskiLaboratório de Citogenômica, Departamento de Patologia, Faculdade de Medicina FMUSP, Universidade de São Paulo, São Paulo, SP, Brazil.ORCID 0000-0003-2236-3956
Universidade de São Paulo · BRHospital das Clínicas da Faculdade de Medicina da Universidade de São Paulo · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCri du chat syndrome (CdCS) is a rare syndrome caused by a partial or complete deletion of the short arm of chromosome 5 (5p-). The main clinical features include a high-pitched cry, facial asymmetry, microcephaly, round face at birth, epicanthal folds, hypotonia, delayed growth and development.

methodsWe studied 14 Brazilian patients with CdCS using genomic array in order to better define the 5p breakpoints and recognize copy number variations (CNVs) that contribute to clinical manifestations associated with the syndrome.

resultsArray confirmed terminal deletions in 13 patients and an interstitial deletion in one patient. It was also possible to map the breakpoints and associate a genomic region of 4.7 Mb to the development of head circumference and cat-like cry. We also found other CNVs concomitant to the 5p deletion including a 9p duplication, a 17q deletion, and a 22q deletion in three different patients.

conclusionWith advancements of molecular cytogenomic methods in the last two decades, it was possible to evidence cryptic alterations and improve the genotype-phenotype correlation. In this work, we describe a new genomic region associated with microcephaly and cat-like cry and highlight the importance of precise delineation of 5p deletion breakpoints and detection of other CNVs in CdCS patients to improve genotype-phenotype correlation to perform a complete clinical and molecular diagnosis.

Indexed as

Chromosome BreakpointsAdolescentAdultChildChild, PreschoolChromosomes, Human, Pair 5Cri-du-Chat SyndromeDNA Copy Number VariationsFemaleHumansMalePhenotypeBrazilian patientscri du chatcytogenomicgenomic array

Identifiers

PMID31568707
PMCPMC7005617
OpenAlexW2979122011

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.