Evidence map›Paper›PMID 31566936›Full record

ArticleMolecular genetics & genomic medicine2019

New insights into genetic variant spectrum and genotype-phenotype correlations of Rubinstein-Taybi syndrome in 39 CREBBP-positive patients.

Virginia Pérez-Grijalba, Alberto García-Oguiza, María López, Judith Armstrong, Sixto García-Miñaur, Jose María Mesa-Latorre, Mar O'Callaghan, Mercé Pineda Marfa, Maria Antonia Ramos-Arroyo, Fernando Santos-Simarro and 2 more

Open access · goldAbstract read
In one paragraph

Article in Molecular genetics & genomic medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 30 citations in OpenAlex.

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  11. [Syndroms associated with benign skin tumors].Der Hautarzt; Zeitschrift fur Dermatologie, Venerologie, und verwandte Gebiete · 2022
    Review
  12. Reprogramming of the epigenome in neurodevelopmental disorders.Critical reviews in biochemistry and molecular biology · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 1 country.

Virginia Pérez-GrijalbaCenter for Biomedical Research (CIBIR), Fundación Rioja Salud, Logroño, Spain.
Alberto García-OguizaDepartment of Pediatrics, San Pedro Hospital, Logroño, Spain.
María LópezCenter for Biomedical Research (CIBIR), Fundación Rioja Salud, Logroño, Spain.
Judith ArmstrongHospital Sant Joan de Déu (HSJD), CIBERER. Esplugues de Llobregat, Barcelona, Spain.ORCID 0000-0003-0588-9307
Sixto García-MiñaurInstitute of Medical and Molecular Genetics (INGEMM)-IdiPAZ, Hospital Universitario La Paz-UAM Madrid, Madrid, Spain.
Jose María Mesa-LatorreUniversity Hospital Príncipe de Asturias, Madrid, Spain.
Mar O'CallaghanHospital Sant Joan de Déu (HSJD), CIBERER. Esplugues de Llobregat, Barcelona, Spain.
Mercé Pineda MarfaHospital Sant Joan de Déu (HSJD), CIBERER. Esplugues de Llobregat, Barcelona, Spain.
Maria Antonia Ramos-ArroyoServicio de Genética Médica, Hospital Virgen del Camino, Pamplona, Spain.
Fernando Santos-SimarroInstitute of Medical and Molecular Genetics (INGEMM)-IdiPAZ, Hospital Universitario La Paz-UAM Madrid, Madrid, Spain.
Verónica SeidelClinical Genetics, Department of Pediatrics, Hospital General Universitario Gregorio Marañón, Madrid, Spain.
Elena Domínguez-GarridoCenter for Biomedical Research (CIBIR), Fundación Rioja Salud, Logroño, Spain.ORCID 0000-0002-2066-0511
Center for Biomedical Research of La Rioja · ESHospital Sant Joan de Déu Barcelona · ESHospital Universitario La Paz · ESHospital General Universitario Gregorio Marañón · ESHospital San Pedro · ESHospital Universitario Príncipe de Asturias · ESHospital Virgen del Camino · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRubinstein-Taybi syndrome (RSTS) is a rare congenital disorder characterized by broad thumbs and halluces, intellectual disability, distinctive facial features, and growth retardation. Clinical manifestations of RSTS are varied and overlap with other syndromes' phenotype, which makes clinical diagnosis challenging. CREBBP is the major causative gene (55%-60% of the cases), whereas pathogenic variants found in EP300 represent the molecular cause in 8% of RSTS patients. A wide range of CREBBP pathogenic variants have been reported so far, including point mutations (30%-50%) and large deletions (10%).

methodsThe aim of this study was to characterize the CREBBP genetic variant spectrum in 39 RSTS patients using Multiplex Ligation-dependent Probe Amplification and DNA sequencing techniques (Sanger and Trio-based whole-exome sequencing).

resultsWe identified 15 intragenic deletions/duplications, ranging from one exon to the entire gene. As a whole, 25 de novo point variants were detected: 4 missense, 12 nonsense, 5 frameshift, and 4 splicing pathogenic variants. Three of them were classified as of uncertain significance and one of the patients carried two different variants.

conclusionSeventeen of the 40 genetic variants detected were reported for the first time in this work contributing, thus, to expand the molecular knowledge of this complex disorder.

Indexed as

Genetic Association StudiesMutationAdolescentAdultChildChild, PreschoolCREB-Binding ProteinE1A-Associated p300 ProteinFemaleGenotypeHumansInfantMalePhenotypeRubinstein-Taybi SyndromeYoung AdultCREB-Binding ProteinCREBBP protein, humanE1A-Associated p300 ProteinEP300 protein, humanCREBBPepigeneticsgenotype-phenotype correlationRubinstein-Taybi syndrome

Identifiers

PMID31566936
PMCPMC6825870
OpenAlexW2978620730

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.