Evidence map›Paper›PMID 31566285›Full record

ArticleStem cells (Dayton, Ohio)2020

Human induced pluripotent stem cell line with genetically encoded fluorescent voltage indicator generated via CRISPR for action potential assessment post-cardiogenesis.

Yao-Hui Sun, Hillary K J Kao, Che-Wei Chang, Alexander Merleev, James L Overton, Dalyir Pretto, Sergey Yechikov, Emanual Maverakis, Nipavan Chiamvimonvat, James W Chan and 1 more

Open access · greenAbstract read
In one paragraph

Article in Stem cells (Dayton, Ohio), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Yao-Hui SunDepartment of Internal Medicine, Division of Cardiovascular Medicine, University of California, Davis, Davis, California.ORCID 0000-0002-3716-6659
Hillary K J KaoDepartment of Internal Medicine, Division of Cardiovascular Medicine, University of California, Davis, Davis, California.
Che-Wei ChangDepartment of Pathology and Laboratory Medicine, University of California, Davis, Sacramento, California.
Alexander MerleevDepartment of Dermatology, University of California, Davis, Davis, California.
James L OvertonDepartment of Internal Medicine, Division of Cardiovascular Medicine, University of California, Davis, Davis, California.
Dalyir PrettoDepartment of Internal Medicine, Division of Cardiovascular Medicine, University of California, Davis, Davis, California.
Sergey YechikovDepartment of Internal Medicine, Division of Cardiovascular Medicine, University of California, Davis, Davis, California.
Emanual MaverakisDepartment of Dermatology, University of California, Davis, Davis, California.ORCID 0000-0002-6294-6294
Nipavan ChiamvimonvatDepartment of Internal Medicine, Division of Cardiovascular Medicine, University of California, Davis, Davis, California.
James W ChanDepartment of Pathology and Laboratory Medicine, University of California, Davis, Sacramento, California.ORCID 0000-0002-6643-7139
Deborah K LieuDepartment of Internal Medicine, Division of Cardiovascular Medicine, University of California, Davis, Davis, California.
California Institute for Regenerative Medicine · USUniversity of California, Davis · USVA Northern California Health Care System · US

Funding

Functional Interactions of Cardiac Ion ChannelsR01HL085844 · NHLBI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI CHIAMVIMONVAT, NIPAVAN · 2007 to 2025
$7.3M
Training Program In Basic & Translational Cardiovascular ScienceT32HL086350 · NHLBI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Martin Cadeiras, David A. Liem · 2008 to 2026
$7.1M
Translational Study of Cardiac DysfunctionR01HL085727 · NHLBI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI CHIAMVIMONVAT, NIPAVAN, SIRISH, PADMINI · 2008 to 2022
$5.7M
Decoding the enigma of cardiac amplificationR01HL137228 · NHLBI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI CHIAMVIMONVAT, NIPAVAN · 2017 to 2020
$2.2M
Regulation of ion channels in the heartI01BX000576 · VA · VA NORTHERN CALIFORNIA HEALTH CARE SYS · PI CHIAMVIMONVAT, NIPAVAN · 2009 to 2019
–
Metabolomics study in patients post myocardial infarctionI01CX001490 · VA · VA NORTHERN CALIFORNIA HEALTH CARE SYS · PI CHIAMVIMONVAT, NIPAVAN · 2017 to 2021
–
BLRD VA I01 BX000576CSRD VA I01 CX001490NHLBI NIH HHS R01 HL085727NHLBI NIH HHS R01 HL085844NHLBI NIH HHS R01 HL137228NHLBI NIH HHS T32 HL086350
6 · The paper itself

Abstract

Genetically encoded fluorescent voltage indicators, such as ArcLight, have been used to report action potentials (APs) in human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs). However, the ArcLight expression, in all cases, relied on a high number of lentiviral vector-mediated random genome integrations (8-12 copy/cell), raising concerns such as gene disruption and alteration of global and local gene expression, as well as loss or silencing of reporter genes after differentiation. Here, we report the use of clustered regularly interspaced short palindromic repeats (CRISPR)/Cas9 nuclease technique to develop a hiPSC line stably expressing ArcLight from the AAVS1 safe harbor locus. The hiPSC line retained proliferative ability with a growth rate similar to its parental strain. Optical recording with conventional epifluorescence microscopy allowed the detection of APs as early as 21 days postdifferentiation, and could be repeatedly monitored for at least 5 months. Moreover, quantification and analysis of the APs of ArcLight-CMs identified two distinctive subtypes: a group with high frequency of spontaneous APs of small amplitudes that were pacemaker-like CMs and a group with low frequency of automaticity and large amplitudes that resembled the working CMs. Compared with FluoVolt voltage-sensitive dye, although dimmer, the ArcLight reporter exhibited better optical performance in terms of phototoxicity and photostability with comparable sensitivities and signal-to-noise ratios. The hiPSC line with targeted ArcLight engineering design represents a useful tool for studying cardiac development or hiPSC-derived cardiac disease models and drug testing.

Indexed as

Action PotentialsCells, CulturedClustered Regularly Interspaced Short Palindromic RepeatsGenetic TherapyHumansInduced Pluripotent Stem CellsMyocytes, Cardiacaction potentialCRISPR/Cas9genetically encoded voltage indicatorshiPSC-derived cardiomyocyteshuman induced pluripotent stem cellsoptical recording

Identifiers

PMID31566285
PMCPMC7304550
OpenAlexW2978475035

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.