Evidence map›Paper›PMID 31563968›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2020

Identification of a polymorphism within the Rosa multiflora muRdr1A gene linked to resistance to multiple races of Diplocarpon rosae W. in tetraploid garden roses (Rosa × hybrida).

Cindy Rouet, Elizabeth A Lee, Travis Banks, Joseph O'Neill, Rachael LeBlanc, Daryl J Somers

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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.1field-weighted citation impact, top 52% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 5 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Cindy RouetVineland Research and Innovation Centre, 4890 Victoria Avenue North, Box 4000, Vineland Station, ON, L0R 2E0, Canada. cindy.rouet@vinelandresearch.com.
Elizabeth A LeeDepartment of Plant Agriculture, University of Guelph, 50 Stone Rd E, Guelph, ON, N1G 2W1, Canada.
Travis BanksVineland Research and Innovation Centre, 4890 Victoria Avenue North, Box 4000, Vineland Station, ON, L0R 2E0, Canada.
Joseph O'NeillVineland Research and Innovation Centre, 4890 Victoria Avenue North, Box 4000, Vineland Station, ON, L0R 2E0, Canada.
Rachael LeBlancVineland Research and Innovation Centre, 4890 Victoria Avenue North, Box 4000, Vineland Station, ON, L0R 2E0, Canada.
Daryl J SomersVineland Research and Innovation Centre, 4890 Victoria Avenue North, Box 4000, Vineland Station, ON, L0R 2E0, Canada.
Vineland Research and Innovation Centre · CAUniversity of Guelph · CA

Funding

Government of Ontario AIP-P013
6 · The paper itself

Abstract

key messageA QTL for resistance to several races of black spot co-located with the known Rrd1 locus in Rosa. A polymorphism in muRdr1A linked to black spot resistance was identified and molecular markers were designed. Black spot, caused by Diplocarpon rosae, is one of the most serious foliar diseases of landscape roses that reduces the marketability and weakens the plants against winter survival. Genetic resistance to black spot (BS) exists and race-specific resistance is a good target to implement marker-assisted selection. High-density single nucleotide polymorphism-based genetic maps were created for the female parent of a tetraploid cross between 'CA60' and 'Singing in the Rain' using genotyping-by-sequencing following a two-way pseudo-testcross strategy. The female linkage map was generated based on 227 individuals and included 31 linkage groups, 1055 markers, with a length of 1980 cM. Race-specific resistance to four D. rosae races (5, 7, 10, 14) was evaluated using a detached leaf assay. BS resistance was also evaluated under natural infection in the field. Resistance to races 5, 10 and 14 of D. rosae and field resistance co-located on chromosome 1. A unique sequence of 32 bp in exon 4 of the muRdr1A gene was identified in 'CA60' that co-segregates with D. rosae resistance. Two diagnostic markers, a presence/absence marker and an INDEL marker, specific to this sequence were designed and validated in the mapping population and a backcross population derived from 'CA60.' Resistance to D. rosae race 7 mapped to a different location on chromosome 1.

Indexed as

Crosses, GeneticGenes, PlantTetraploidyAllelesAscomycotaBase SequenceChromosome MappingChromosome SegregationDisease ResistanceGenetic Association StudiesGenetic MarkersHost SpecificityModels, GeneticPhenotypePolymorphism, Single NucleotideQuantitative Trait LociGenetic MarkersDisease resistanceGenotyping-by-sequencing (GBS)High-density genetic mapMarker-assisted breedingSingle nucleotide polymorphism (SNP)Tetraploid

Identifiers

PMID31563968
OpenAlexW2975455344

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.