Evidence map›Paper›PMID 31562305›Full record

ArticleNature communications2019

The ALFA-tag is a highly versatile tool for nanobody-based bioscience applications.

Hansjörg Götzke, Markus Kilisch, Markel Martínez-Carranza, Shama Sograte-Idrissi, Abirami Rajavel, Thomas Schlichthaerle, Niklas Engels, Ralf Jungmann, Pål Stenmark, Felipe Opazo and 1 more

Abstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 393 papers.

0numbers the graph read from it
0cells of the map it votes in
393citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

393 citing papers in PubMed.

  1. Article
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  9. Antigen-Detected NMR for Minimal Epitope Engineering and Structure-Guided Selection of a NaAdvanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  10. Article
  11. Article
  12. Review
  13. Quantitative nanoscale imaging shows peptide-MHC I complexes are monomeric and spatially regulated in human dendritic cells.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  14. Article
  15. Article
  16. Article
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  19. Article
  20. Thousandfold Expansion Microscopy.bioRxiv : the preprint server for biology · 2026
    Article

333 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Hansjörg GötzkeNanoTag Biotechnologies GmbH, Rudolf-Wissell-Straße 28a, 37079, Göttingen, Germany.
Markus KilischNanoTag Biotechnologies GmbH, Rudolf-Wissell-Straße 28a, 37079, Göttingen, Germany.
Markel Martínez-CarranzaDepartment of Biochemistry and Biophysics, Stockholm University, S-106 91, Stockholm, Sweden.ORCID http://orcid.org/0000-0003-0192-9762
Shama Sograte-IdrissiInstitute of Neuro- and Sensory Physiology, University Medical Center Göttingen, Humboldtallee 23, 37073, Göttingen, Germany.ORCID http://orcid.org/0000-0003-4271-7897
Abirami RajavelNanoTag Biotechnologies GmbH, Rudolf-Wissell-Straße 28a, 37079, Göttingen, Germany.ORCID http://orcid.org/0000-0003-4179-2668
Thomas SchlichthaerleFaculty of Physics and Center for Nanoscience, LMU Munich, Geschwister-Scholl-Platz 1, 80539, Munich, Germany.
Niklas EngelsInstitute of Cellular and Molecular Immunology, University Medical Center Göttingen, Humboldtallee 34, 37073, Göttingen, Germany.ORCID http://orcid.org/0000-0003-2341-4954
Ralf JungmannFaculty of Physics and Center for Nanoscience, LMU Munich, Geschwister-Scholl-Platz 1, 80539, Munich, Germany.ORCID http://orcid.org/0000-0003-4607-3312
Pål StenmarkDepartment of Biochemistry and Biophysics, Stockholm University, S-106 91, Stockholm, Sweden.ORCID http://orcid.org/0000-0003-4777-3417
Felipe OpazoNanoTag Biotechnologies GmbH, Rudolf-Wissell-Straße 28a, 37079, Göttingen, Germany. fopazo@gwdg.de.ORCID http://orcid.org/0000-0002-4968-9713
Steffen FreyNanoTag Biotechnologies GmbH, Rudolf-Wissell-Straße 28a, 37079, Göttingen, Germany. steffen.frey@nano-tag.com.ORCID http://orcid.org/0000-0002-5134-9961

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Specialized epitope tags are widely used for detecting, manipulating or purifying proteins, but often their versatility is limited. Here, we introduce the ALFA-tag, a rationally designed epitope tag that serves a remarkably broad spectrum of applications in life sciences while outperforming established tags like the HA-, FLAG®- or myc-tag. The ALFA-tag forms a small and stable α-helix that is functional irrespective of its position on the target protein in prokaryotic and eukaryotic hosts. We characterize a nanobody (NbALFA) binding ALFA-tagged proteins from native or fixed specimen with low picomolar affinity. It is ideally suited for super-resolution microscopy, immunoprecipitations and Western blotting, and also allows in vivo detection of proteins. We show the crystal structure of the complex that enabled us to design a nanobody mutant (NbALFA

Indexed as

3T3 CellsAnimalsChlorocebus aethiopsCOS CellsEpitopesGreen Fluorescent ProteinsHeLa CellsHumansMiceMicroscopy, FluorescenceMutationProtein BindingProteinsRecombinant Fusion ProteinsSingle-Domain AntibodiesEpitopesGreen Fluorescent ProteinsProteinsRecombinant Fusion ProteinsSingle-Domain Antibodies

Identifiers

PMID31562305
PMCPMC6764986

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.