Evidence map›Paper›PMID 31560853›Full record

ArticleJournal of chemical theory and computation2019

Quantitative Characterization of Protein-Lipid Interactions by Free Energy Simulation between Binary Bilayers.

Soohyung Park, Min Sun Yeom, Olaf S Andersen, Richard W Pastor, Wonpil Im

Open access · greenAbstract read
In one paragraph

Article in Journal of chemical theory and computation, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Energetics of the Transmembrane Peptide Sorting by Hydrophobic Mismatch.The journal of physical chemistry letters · 2024
    Article
  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 5 institutions in 2 countries.

Soohyung ParkDepartments of Biological Sciences and Bioengineering , Lehigh University , Bethlehem , Pennsylvania 18015 , United States.
Min Sun YeomKorean Institute of Science and Technology Information , Daejeon , Korea.
Olaf S AndersenDepartment of Physiology and Biophysics , Weill Cornell Medicine , New York , New York 10065 , United States.
Richard W PastorLaboratory of Computational Biology, National Heart, Lung and Blood Institute , National Institutes of Health , Bethesda , Maryland 20892 , United States.ORCID http://orcid.org/0000-0002-2454-5131
Wonpil ImDepartments of Biological Sciences and Bioengineering , Lehigh University , Bethlehem , Pennsylvania 18015 , United States.ORCID http://orcid.org/0000-0001-5642-6041
Cornell University · USKorea Institute for Advanced Study · KRKorea Institute of Science & Technology Information · KRLehigh University · USNational Institutes of Health · US

Funding

Energetics of Channel-Bilayer InteractionsR01GM021342 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI ANDERSEN, OLAF S. · 1985 to 2021
$9.9M
J. NRSA Training CoreTL1TR002386 · NCATS · WEILL MEDICAL COLL OF CORNELL UNIV · PI Genevieve Giny Fouda Amou ou · 2017 to 2026
$5.8M
NCATS NIH HHS TL1 TR002386NIGMS NIH HHS R01 GM021342
6 · The paper itself

Abstract

Using a recently developed binary bilayer system (BBS) consisting of two patches of laterally contacting bilayers, umbrella sampling molecular dynamics (MD) simulations were performed for quantitative characterization of protein-lipid interactions. The BBS is composed of 1,2-dilauroyl-

Indexed as

DimyristoylphosphatidylcholineGramicidinHydrophobic and Hydrophilic InteractionsLipid BilayersMolecular Dynamics SimulationPhosphatidylcholinesThermodynamics1,2-dilauroylphosphatidylcholineDimyristoylphosphatidylcholineGramicidinLipid BilayersPhosphatidylcholines

Identifiers

PMID31560853
PMCPMC7076909
OpenAlexW2976387971

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.