Evidence map›Paper›PMID 31560764›Full record

ArticleInvestigative ophthalmology & visual science2019

Quantitative Studies of Muscleblind Proteins and Their Interaction With TCF4 RNA Foci Support Involvement in the Mechanism of Fuchs' Dystrophy.

Ziye Rong, Jiaxin Hu, David R Corey, V Vinod Mootha

Open access · goldAbstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 19 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Targeting the ExpandedACS omega · 2023
    Article
  8. Article
  9. Article
  10. Update on the genetics of corneal endothelial dystrophies.Indian journal of ophthalmology · 2022
    Review
  11. ArcRNAs and the formation of nuclear bodies.Mammalian genome : official journal of the International Mammalian Genome Society · 2022
    Review
  12. Review
  13. Review
  14. Review
  15. Review
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Ziye RongDepartment of Ophthalmology, University of Texas Southwestern Medical Center, Dallas, Texas, United States.
Jiaxin HuDepartment of Pharmacology, University of Texas Southwestern Medical Center, Dallas, Texas, United States.
David R CoreyDepartment of Pharmacology, University of Texas Southwestern Medical Center, Dallas, Texas, United States.
V Vinod MoothaDepartment of Ophthalmology, University of Texas Southwestern Medical Center, Dallas, Texas, United States.
Southwestern Medical Center · USThe University of Texas Southwestern Medical Center · US

Funding

Recognition of Cellular Targets by single and double-stranded nucleic acidsR35GM118103 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI David R Corey · 2016 to 2026
$5.7M
Laying a Foundation for Precision Medicine for Fuchs' DystrophyR01EY022161 · NEI · UT SOUTHWESTERN MEDICAL CENTER · PI MOOTHA, VENKATESWARA VINOD · 2012 to 2024
$4.8M
Core Grant for Vision ResearchP30EY020799 · NEI · UT SOUTHWESTERN MEDICAL CENTER · PI NIEDERKORN, JERRY · 2010 to 2016
$4.1M
NEI NIH HHS P30 EY020799NEI NIH HHS R01 EY022161NIGMS NIH HHS R35 GM118103
6 · The paper itself

Abstract

Purpose: Fuchs' endothelial corneal dystrophy (FECD) is a major cause of vision loss and the most common nucleotide repeat disorder, affecting 4% of United States population greater than 40 years of age. Seventy percent of FECD cases are due to an intronic CTG expansion within the TCF4 gene, resulting in accumulation of CUG repeat RNA nuclear foci in corneal endothelium. Each endothelial cell has approximately two sense foci, and each focus is a single RNA molecule. This study aimed to obtain a better understanding of how rare repeat RNA species lead to disease. Methods: We quantitatively examined muscleblind-like (MBNL) proteins and their interaction with foci in both patient-derived corneal endothelial cell lines and human corneal endothelial tissue. Results: Using fluorescent in situ hybridization and immunofluorescence, we found that depletion of both MBNL1 and MBNL2 reduces nuclear RNA foci formed by the repeat, suggesting that both are necessary for foci. Quantitative studies of RNA and protein copy number revealed MBNLs to be abundant in the total cellular pool in endothelial cell lines but are much lower in human corneal endothelial tissue. Studies using human tissue nuclear and cytoplasmic fractions indicate that most MBNL proteins are localized to the cytoplasm. Conclusions: The low levels of MBNL1/2 in corneal tissue, in combination with the small fraction of protein in the nucleus, may make corneal endothelial cells especially susceptible to sequestration of MBNL1/2 by CUG repeat RNA. These observations may explain how a limited number of RNA molecules can cause widespread alteration of splicing and late-onset degenerative FECD.

Indexed as

Cell LineCell NucleusCytoplasmEndothelium, CornealFluorescent Antibody TechniqueFuchs' Endothelial DystrophyHumansImmunoblottingIn Situ Hybridization, FluorescenceProtein Interaction MapsReal-Time Polymerase Chain ReactionRNARNA-Binding ProteinsRNA, Small InterferingTranscription Factor 4TransfectionMBNL1 protein, humanMBNL2 protein, humanRNARNA-Binding ProteinsRNA, Small InterferingTCF4 protein, humanTranscription Factor 4

Identifiers

PMID31560764
PMCPMC6779288
OpenAlexW2977127603

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.