Evidence map›Paper›PMID 31560515›Full record

ArticleACS chemical biology2019

Selection of 2'-Deoxy-2'-Fluoroarabino Nucleic Acid (FANA) Aptamers That Bind HIV-1 Integrase with Picomolar Affinity.

Kevin M Rose, Irani Alves Ferreira-Bravo, Min Li, Robert Craigie, Mark A Ditzler, Philipp Holliger, Jeffrey J DeStefano

Open access · hybridAbstract read
In one paragraph

Article in ACS chemical biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 46 citations in OpenAlex.

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  16. Thermophilic Nucleic Acid Polymerases and Their Application in Xenobiology.International journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 6 institutions in 2 countries.

Kevin M RoseCell Biology and Molecular Genetics, Bioscience Research Building , University of Maryland , College Park , Maryland 20742 , United States.ORCID https://orcid.org/0000-0002-9373-4147
Irani Alves Ferreira-BravoCell Biology and Molecular Genetics, Bioscience Research Building , University of Maryland , College Park , Maryland 20742 , United States.
Min LiLaboratory of Molecular Biology, NIDDK , National Institutes of Health , Bethesda , Maryland 20892 , United States.
Robert CraigieLaboratory of Molecular Biology, NIDDK , National Institutes of Health , Bethesda , Maryland 20892 , United States.
Mark A DitzlerExobiology Branch, Space Science and Astrobiology Division , NASA Ames Research Center , Moffett Field , California 94035 , United States.
Philipp HolligerMRC Laboratory of Molecular Biology , Francis Crick Avenue, Cambridge Biomedical Campus , Cambridge CB2 0QH , United Kingdom.ORCID 0000-0002-3440-9854
Jeffrey J DeStefanoCell Biology and Molecular Genetics, Bioscience Research Building , University of Maryland , College Park , Maryland 20742 , United States.ORCID 0000-0002-8710-7622
University of Maryland, College Park · USAmes Research Center · USBioscience Research · USMRC Laboratory of Molecular Biology · GBNational Institute of Diabetes and Digestive and Kidney Diseases · USNational Institutes of Health · US

Funding

Biochemistry of HIV reverse transcriptase fidelity and inhibitor interactionsR01AI150480 · NIAID · UNIV OF MARYLAND, COLLEGE PARK · PI DESTEFANO, JEFFREY J · 2019 to 2019
$294k
Medical Research Council MC_U105178804NIAID NIH HHS R01 AI150480
6 · The paper itself

Abstract

Systematic Evolution of Ligands by Exponential Enrichment (SELEX) is the iterative process by which nucleic acids that can bind with high affinity and specificity (termed aptamers) to specific protein targets are selected. Using a SELEX protocol adapted for Xeno-Nucleic Acid (XNA) as a suitable substrate for aptamer generation, 2'-fluoroarabinonucleic acid (FANA) was used to select several related aptamers to HIV-1 integrase (IN). IN bound FANA aptamers with equilibrium dissociation constants (

Indexed as

Aptamers, NucleotideArabinonucleotidesBase SequenceHIV-1HIV IntegraseRNASELEX Aptamer TechniqueSequence AlignmentAptamers, NucleotideArabinonucleotidesHIV Integrasep31 integrase protein, Human immunodeficiency virus 1RNA

Identifiers

PMID31560515
PMCPMC7005942
OpenAlexW2976858486

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.