ArticleDatabase : the journal of biological databases and curation2019
RiceRelativesGD: a genomic database of rice relatives for rice research.
Article in Database : the journal of biological databases and curation, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
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Who cites it
9 citing papers in PubMed.
- DupyliCate: mining, classifying, and characterizing gene duplications.Scientific reports · 2026Article
- The evolution history of an allotetraploid mangrove tree analysed with a new tool Allo4D.Plant biotechnology journal · 2024Article
- Integrated transcriptome and metabolome analysis unveil the response mechanism in wild rice (Frontiers in genetics · 2023Article
- Conventional and Omics Approaches for Understanding the Abiotic Stress Response in Cereal Crops-An Updated Overview.Plants (Basel, Switzerland) · 2022Review
- Chromosome-level genome assembly of Zizania latifolia provides insights into its seed shattering and phytocassane biosynthesis.Communications biology · 2022Article
- Genomics and transcriptomics to protect rice (Frontiers in plant science · 2022Review
- Crop breeding for a changing climate: integrating phenomics and genomics with bioinformatics.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021Review
- Interdependent evolution of biosynthetic gene clusters for momilactone production in rice.The Plant cell · 2021Article
- ThRSDB: a database of Thai rice starch composition, molecular structure and functionality.Database : the journal of biological databases and curation · 2020Article
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Authors and funding
12 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Rice (Oryza sativa L.) is one of the most important crops worldwide. Its relatives, including phylogenetically related species of rice and paddy weeds with a similar ecological niche, can provide crucial genetic resources (such as resistance to biotic and abiotic stresses and high photosynthetic efficiency) for rice research. Although many rice genomic databases have been constructed, a database providing large-scale curated genomic data from rice relatives and offering specific gene resources is still lacking. Here, we present RiceRelativesGD, a user-friendly genomic database of rice relatives. RiceRelativesGD integrates large-scale genomic resources from 2 cultivated rice and 11 rice relatives, including 208 321 specific genes and 13 643 genes related to photosynthesis and responsive to external stimuli. Diverse bioinformatics tools are embedded in the database, which allow users to search, visualize and download the information of interest. To our knowledge, this is the first genomic database providing a centralized genetic resource of rice relatives. RiceRelativesGD will serve as a significant and comprehensive knowledgebase for the rice community.
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