Evidence map›Paper›PMID 31558743›Full record

ArticleScientific reports2019

Structural insight into glucose repression of the mannitol operon.

Mangyu Choe, Huitae Min, Young-Ha Park, Yeon-Ran Kim, Jae-Sung Woo, Yeong-Jae Seok

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 4 countries.

Mangyu ChoeSchool of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul, 00826, Korea.
Huitae MinSchool of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul, 00826, Korea.
Young-Ha ParkSchool of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul, 00826, Korea.
Yeon-Ran KimSchool of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul, 00826, Korea.
Jae-Sung WooDepartment of Life Sciences, Korea University, 145 Anam-ro, Seongbuk-gu, Seoul, 02841, Republic of Korea. jaesungwoo@korea.ac.kr.
Yeong-Jae SeokSchool of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul, 00826, Korea. yjseok@snu.ac.kr.ORCID http://orcid.org/0000-0003-0379-3619
Seoul National University · KRKorea University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Carbon catabolite repression is a regulatory mechanism to ensure sequential utilization of carbohydrates and is usually accomplished by repression of genes for the transport and metabolism of less preferred carbon compounds by a more preferred one. Although glucose and mannitol share the general components, enzyme I and HPr, of the phosphoenolpyruvate-dependent phosphotransferase system (PTS) for their transport, glucose represses the transport and metabolism of mannitol in a manner dependent on the mannitol operon repressor MtlR in Escherichia coli. In a recent study, we identified the dephosphorylated form of HPr as a regulator determining the glucose preference over mannitol by interacting with and augmenting the repressor activity of MtlR in E. coli. Here, we determined the X-ray structure of the MtlR-HPr complex at 3.5 Å resolution to understand how phosphorylation of HPr impedes its interaction with MtlR. The phosphorylation site (His15) of HPr is located close to Glu108 and Glu140 of MtlR and phosphorylation at His15 causes electrostatic repulsion between the two proteins. Based on this structural insight and comparative sequence analyses, we suggest that the determination of the glucose preference over mannitol solely by the MtlR-HPr interaction is conserved within  the Enterobacteriaceae family.

Indexed as

OperonBacterial ProteinsCrystallography, X-RayEscherichia coliEscherichia coli ProteinsGlucoseMannitolMolecular Dynamics SimulationMutationPhosphoenolpyruvate Sugar Phosphotransferase SystemPhosphorylationProtein BindingRepressor ProteinsBacterial ProteinsEscherichia coli ProteinsGlucoseMannitolMtlR protein, E coliphosphocarrier protein HPrPhosphoenolpyruvate Sugar Phosphotransferase SystemRepressor Proteins

Identifiers

PMID31558743
PMCPMC6763467
OpenAlexW2975510115

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.