Evidence map›Paper›PMID 31557470›Full record

ArticleDevelopmental biology2020

The exon junction complex is required for stem and progenitor cell maintenance in planarians.

Casey Kimball, Kaleigh Powers, John Dustin, Vanessa Poirier, Jason Pellettieri

Open access · hybridAbstract read
In one paragraph

Article in Developmental biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Defined diets for freshwater planarians.Developmental dynamics : an official publication of the American Association of Anatomists · 2022
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Casey KimballDepartment of Biology, Keene State College, Keene, NH, USA.
Kaleigh PowersDepartment of Biology, Keene State College, Keene, NH, USA.
John DustinDepartment of Biology, Keene State College, Keene, NH, USA.
Vanessa PoirierDepartment of Biology, Keene State College, Keene, NH, USA.
Jason PellettieriDepartment of Biology, Keene State College, Keene, NH, USA. Electronic address: jpellettieri@keene.edu.
Keene State College · US

Funding

Ultrastructural analysis of axonal Kv2-mediated endoplasmic reticulum/plasma membrane (ER/PM) junctionsP20GM103506 · NIGMS · DARTMOUTH COLLEGE · PI STEVEN FIERING · 2012 to 2026
$60.1M
NIGMS NIH HHS P20 GM103506
6 · The paper itself

Abstract

Named for its assembly near exon-exon junctions during pre-mRNA splicing, the exon junction complex (EJC) regulates multiple aspects of RNA biochemistry, including export of spliced mRNAs from the nucleus and translation. Transcriptome analyses have revealed broad EJC occupancy of spliced metazoan transcripts, yet inhibition of core subunits has been linked to surprisingly specific phenotypes and a growing number of studies support gene-specific regulatory roles. Here we report results from a classroom-based RNAi screen revealing the EJC is necessary for regeneration in the planarian flatworm Schmidtea mediterranea. RNAi animals rapidly lost the stem and progenitor cells that drive formation of new tissue during both regeneration and cell turnover, but exhibited normal amputation-induced changes in gene expression in differentiated tissues. Together with previous reports that partial loss of EJC function causes stem cell defects in Drosophila and mice, our observations implicate the EJC as a conserved, posttranscriptional regulator of gene expression in stem cell lineages. This work also highlights the combined educational and scientific impacts of discovery-based research in the undergraduate biology curriculum.

Indexed as

AnimalsExonsGene Knockdown TechniquesHelminth ProteinsIntronsPlanariansRegenerationRNA InterferenceRNA Processing, Post-TranscriptionalRNA Splicing FactorsStem CellsHelminth ProteinsRNA Splicing FactorsEJCPosttranscriptional regulationRegenerationRNAi

Identifiers

PMID31557470
PMCPMC8544814
OpenAlexW2975382254

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.