Evidence map›Paper›PMID 31557418›Full record

ArticleJournal of cellular and molecular medicine2019

Elevated hsa-miR-590-3p expression down-regulates HMGB2 expression and contributes to the severity of IgA nephropathy.

Yaling Zhai, Yuanyuan Qi, Xiaoqing Long, Yanna Dou, Dong Liu, Genyang Cheng, Jing Xiao, Zhangsuo Liu, Zhanzheng Zhao

Open access · goldAbstract read
In one paragraph

Article in Journal of cellular and molecular medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
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  3. Review
  4. Extracellular vesicles derived from patients with antibody-mediated rejection induce tubular senescence and endothelial to mesenchymal transition in renal cells.American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons · 2022
    Article
  5. Article
  6. Review
  7. MicroRNAs in IgA nephropathy.Renal failure · 2021
    Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Yaling ZhaiDepartment of Nephrology, The First Affiliated Hospital of Zhengzhou University, The Renal Research Institution of Zhengzhou University, Zhengzhou, China.ORCID 0000-0001-8638-708X
Yuanyuan QiDepartment of Nephrology, The First Affiliated Hospital of Zhengzhou University, The Renal Research Institution of Zhengzhou University, Zhengzhou, China.
Xiaoqing LongDepartment of Nephrology, The First Affiliated Hospital of Zhengzhou University, The Renal Research Institution of Zhengzhou University, Zhengzhou, China.
Yanna DouDepartment of Nephrology, The First Affiliated Hospital of Zhengzhou University, The Renal Research Institution of Zhengzhou University, Zhengzhou, China.
Dong LiuDepartment of Nephrology, The First Affiliated Hospital of Zhengzhou University, The Renal Research Institution of Zhengzhou University, Zhengzhou, China.
Genyang ChengDepartment of Nephrology, The First Affiliated Hospital of Zhengzhou University, The Renal Research Institution of Zhengzhou University, Zhengzhou, China.
Jing XiaoDepartment of Nephrology, The First Affiliated Hospital of Zhengzhou University, The Renal Research Institution of Zhengzhou University, Zhengzhou, China.
Zhangsuo LiuDepartment of Nephrology, The First Affiliated Hospital of Zhengzhou University, The Renal Research Institution of Zhengzhou University, Zhengzhou, China.
Zhanzheng ZhaoDepartment of Nephrology, The First Affiliated Hospital of Zhengzhou University, The Renal Research Institution of Zhengzhou University, Zhengzhou, China.ORCID 0000-0001-6079-1631
First Affiliated Hospital of Zhengzhou University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Peripheral blood mononuclear cells (PBMCs) play important roles in the pathogenesis of IgA nephropathy (IgAN). Our study aimed to provide a deep understanding of IgAN and focused on the dysregulation of hsa-miR-590-3p and its target gene HMGB2 in PBMCs. Three gene expression profile datasets (GSE14795, GSE73953 and GSE25590) were downloaded from the GEO database. The DEGs (differentially expressed genes)-miRNA network that was associated with IgAN was constructed by Cytoscape, and HMGB2 and hsa-miR-590-3p were selected for further exploration. The dual-luciferase reporter system was utilized to verify their interaction. Then, the expression levels of HMGB2 and hsa-miR-590-3p in PBMCs were detected by qPCR in another cohort, and the correlation of their expression levels with the clinical pathological manifestations and serum Gd-IgA1(galactose-deficient IgA1) levels was also investigated. HMGB2 was identified as the target gene of hsa-miR-590-3p. Furtherly, the elderly patients had higher HMGB2 expression levels than the expression levels of the younger patients. As the serum creatinine, serum BUN levels increased, the expression of HMGB2 decreased; Besides, the HMGB2 expression was positively correlated with serum complement 3(C3) levels, and it also had a negative correlation with the diastolic blood pressure, but not reach statistical significance. What is more, both hsa-miR-590-3p and HMGB2 expression had a slight correlation tendency with serum Gd-IgA1 levels in the whole population. In conclusion, HMGB2, the target gene of hsa-miR-590-3p, was identified to correlate with the severity of IgAN, and this provides more clues for the pathogenesis of IgAN.

Indexed as

Gene Expression RegulationSeverity of Illness IndexAdultBiomarkersCohort StudiesFemaleGlomerulonephritis, IGAHMGB2 ProteinHumansMaleMicroRNAsPrognosisTranscriptomeBiomarkersHMGB2 ProteinMicroRNAsMIRN590 microRNA, humanHMGB2hsa-miR-590-3pIgA nephropathy

Identifiers

PMID31557418
PMCPMC6815813
OpenAlexW2975464941

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.