Evidence map›Paper›PMID 31557302›Full record

ArticleJournal of experimental botany2020

Overexpression of HMG-CoA synthase promotes Arabidopsis root growth and adversely affects glucosinolate biosynthesis.

Pan Liao, Shiu-Cheung Lung, Wai Lung Chan, Thomas J Bach, Clive Lo, Mee-Len Chye

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. HeterologousInternational journal of molecular sciences · 2023
    Article
  5. Article
  6. Chromosome-level genome assembly ofHorticulture research · 2022
    Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Pan LiaoSchool of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China.
Shiu-Cheung LungSchool of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China.
Wai Lung ChanSchool of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China.
Thomas J BachCentre National de la Recherche Scientifique, UPR 2357, Institut de Biologie Moléculaire des Plantes, Université de Strasbourg, Strasbourg, France.
Clive LoSchool of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China.
Mee-Len ChyeSchool of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China.
University of Hong Kong · HKHong Kong Biotechnology Organization · CNInstitut de Biologie Moléculaire des Plantes · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

3-Hydroxy-3-methylglutaryl-CoA synthase (HMGS) catalyses the second step of the mevalonate (MVA) pathway. An HMGS inhibitor (F-244) has been reported to retard growth in wheat, tobacco, and Brassica juncea, but the mechanism remains unknown. Although the effects of HMGS on downstream isoprenoid metabolites have been extensively reported, not much is known on how it might affect non-isoprenoid metabolic pathways. Here, the mechanism of F-244-mediated inhibition of primary root growth in Arabidopsis and the relationship between HMGS and non-isoprenoid metabolic pathways were investigated by untargeted SWATH-MS quantitative proteomics, quantitative real-time PCR, and target metabolite analysis. Our results revealed that the inhibition of primary root growth caused by F-244 was a consequence of reduced stigmasterol, auxin, and cytokinin levels. Interestingly, proteomic analyses identified a relationship between HMGS and glucosinolate biosynthesis. Inhibition of HMGS activated glucosinolate biosynthesis, resulting from the induction of glucosinolate biosynthesis-related genes, suppression of sterol biosynthesis-related genes, and reduction in sterol levels. In contrast, HMGS overexpression inhibited glucosinolate biosynthesis, due to down-regulation of glucosinolate biosynthesis-related genes, up-regulation of sterol biosynthesis-related genes, and increase in sterol content. Thus, HMGS might represent a target for the manipulation of glucosinolate biosynthesis, given the regulatory relationship between HMGS in the MVA pathway and glucosinolate biosynthesis.

Indexed as

Gene Expression Regulation, PlantArabidopsisArabidopsis ProteinsGene Expression Regulation, EnzymologicGlucosinolatesHydroxymethylglutaryl-CoA SynthasePlant RootsPlants, Genetically ModifiedArabidopsis ProteinsGlucosinolatesHydroxymethylglutaryl-CoA SynthaseArabidopsisF-244glucosinolateHMGSisoprenoidmevalonateprimary rootproteomics

Identifiers

PMID31557302
PMCPMC6913736
OpenAlexW2975446435

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.