Evidence map›Paper›PMID 31557273›Full record

ArticlePLoS pathogens2019

Long-term surviving influenza infected cells evade CD8+ T cell mediated clearance.

Jessica K Fiege, Ian A Stone, Rebekah E Dumm, Barbara M Waring, Brian T Fife, Judith Agudo, Brian D Brown, Nicholas S Heaton, Ryan A Langlois

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Tropism for ciliated cells is the dominant driver of influenza viral burst size in the human airway.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Synthetic Virology: Building Viruses to Better Understand Them.Cold Spring Harbor perspectives in medicine · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Jessica K FiegeUniversity of Minnesota, Department of Microbiology and Immunology and the Center for Immunology, Minneapolis, Minnesota, United States of America.ORCID 0000-0002-4129-8742
Ian A StoneUniversity of Minnesota, Department of Microbiology and Immunology and the Center for Immunology, Minneapolis, Minnesota, United States of America.
Rebekah E DummDuke University School of Medicine, Department of Molecular Genetics and Microbiology, Durham, North Carolina, United States of America.
Barbara M WaringUniversity of Minnesota, Department of Microbiology and Immunology and the Center for Immunology, Minneapolis, Minnesota, United States of America.
Brian T FifeUniversity of Minnesota, Department of Medicine and the Center for Immunology, Minneapolis, Minnesota, United States of America.ORCID 0000-0001-9826-5637
Judith AgudoIcahn School of Medicine at Mount Sinai, Department of Genetics and Genomic Sciences, New York City, New York, United States of America.
Brian D BrownIcahn School of Medicine at Mount Sinai, Department of Genetics and Genomic Sciences, New York City, New York, United States of America.
Nicholas S HeatonDuke University School of Medicine, Department of Molecular Genetics and Microbiology, Durham, North Carolina, United States of America.
Ryan A LangloisUniversity of Minnesota, Department of Microbiology and Immunology and the Center for Immunology, Minneapolis, Minnesota, United States of America.ORCID 0000-0002-0515-571X
University of Minnesota · USDuke University · USIcahn School of Medicine at Mount Sinai · US

Funding

Women's CancerP30CA077598 · NCI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI Jeffrey S. Miller · 1998 to 2026
$100.4M
ORGANIZATION AND FUNCTIONS OF CELLULAR STRUCTUREST32GM007184 · NIGMS · DUKE UNIVERSITY · PI JINKS-ROBERTSON, SUE · 1985 to 2019
$18.2M
TRAINING-PULMONARY CELL &MOLECULAR BIOLOGY &PHYSIOLOGYT32HL007741 · NHLBI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI DUDLEY, R. ADAMS, INGBAR, DAVID H · 1994 to 2023
$13.9M
Loss of cellular identity after influenza virus infection and effects on pulmonary functionR01HL142985 · NHLBI · DUKE UNIVERSITY · PI HEATON, NICHOLAS S · 2018 to 2022
$2.8M
Mechanisms and consequences of epithelial cell survival from influenza virus infection.R01AI132962 · NIAID · UNIVERSITY OF MINNESOTA · PI LANGLOIS, RYAN · 2017 to 2021
$2.3M
The effects of cells that survive direct influenza A virus infection on lung repairR21AI133444 · NIAID · DUKE UNIVERSITY · PI HEATON, NICHOLAS S · 2017 to 2018
$431k
Harnessing microRNAs to explore influenza virus immunityK22AI110581 · NIAID · UNIVERSITY OF MINNESOTA · PI LANGLOIS, RYAN · 2015 to 2016
$270k
NCI NIH HHS P30 CA077598NHLBI NIH HHS R01 HL142985NHLBI NIH HHS T32 HL007741NIAID NIH HHS K22 AI110581NIAID NIH HHS R01 AI132962NIAID NIH HHS R21 AI133444NIGMS NIH HHS T32 GM007184
6 · The paper itself

Abstract

Influenza A virus (IAV) is a seasonal pathogen with the potential to cause devastating pandemics. IAV infects multiple epithelial cell subsets in the respiratory tract, eliciting damage to the lungs. Clearance of IAV is primarily dependent on CD8+ T cells, which must balance control of the infection with immunopathology. Using a virus expressing Cre recombinase to permanently label infected cells in a Cre-inducible reporter mouse, we previously discovered infected club cells that survive both lytic virus replication and CD8+ T cell-mediated clearance. In this study, we demonstrate that ciliated epithelial cells, type I and type II alveolar cells can also become survivor cells. Survivor cells are stable in the lung long-term and demonstrate enhanced proliferation compared to uninfected cells. When we investigated how survivor cells evade CD8+ T cell killing we observed that survivor cells upregulated the inhibitory ligand PD-L1, but survivor cells did not use PD-L1 to evade CD8+ T cell killing. Instead our data suggest that survivor cells are not inherently resistant to CD8+ T cell killing, but instead no longer present IAV antigen and cannot be detected by CD8+ T cells. Finally, we evaluate the failure of CD8+ T cells to kill these previously infected cells. This work demonstrates that additional cell types can survive IAV infection and that these cells robustly proliferate and are stable long term. By sparing previously infected cells, the adaptive immune system may be minimizing pathology associated with IAV infection.

Indexed as

Immune EvasionAdaptive ImmunityAnimalsB7-H1 AntigenCD8-Positive T-LymphocytesCell ProliferationCell SurvivalCytotoxicity, ImmunologicHumansImmunity, CellularInfluenza A virusInfluenza, HumanLungMiceMice, Inbred C57BLMice, TransgenicB7-H1 AntigenCD274 protein, humanPDCD1 protein, humanProgrammed Cell Death 1 Receptor

Identifiers

PMID31557273
PMCPMC6782110
OpenAlexW2976757604

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.