Evidence map›Paper›PMID 31557215›Full record

ArticlePloS one2019

Impact of the severity of negative energy balance on gene expression in the subcutaneous adipose tissue of periparturient primiparous Holstein dairy cows: Identification of potential novel metabolic signals for the reproductive system.

Namya Mellouk, Christelle Rame, Delphine Naquin, Yan Jaszczyszyn, Jean-Luc Touzé, Eric Briant, Daniel Guillaume, Theodoros Ntallaris, Patrice Humblot, Joëlle Dupont

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Namya MelloukINRA UMR85 Physiologie de la Reproduction et des Comportements, Nouzilly, France.
Christelle RameINRA UMR85 Physiologie de la Reproduction et des Comportements, Nouzilly, France.
Delphine NaquinInstitute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Sud, Gif-sur-Yvette, France.
Yan JaszczyszynInstitute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Sud, Gif-sur-Yvette, France.
Jean-Luc TouzéINRA UMR85 Physiologie de la Reproduction et des Comportements, Nouzilly, France.
Eric BriantINRA, UEPAO 1297, Nouzilly, France.
Daniel GuillaumeINRA UMR85 Physiologie de la Reproduction et des Comportements, Nouzilly, France.
Theodoros NtallarisDivision of reproduction, Department of Clinical Sciences, SLU, Uppsala, Sweden.
Patrice HumblotDivision of reproduction, Department of Clinical Sciences, SLU, Uppsala, Sweden.
Joëlle DupontINRA UMR85 Physiologie de la Reproduction et des Comportements, Nouzilly, France.ORCID 0000-0002-8046-7705
Université de Tours · FRUniversité Paris-Sud · FRUppsala University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The severity of negative energy balance (NEB) in high-producing dairy cows has a high incidence among health diseases. The cow's energy status during early lactation critically affects metabolic and reproductive parameters. The first objective of this study was to investigate by RNA-seq analysis and RT-qPCR the gene expression profile in white adipose tissue and by gene ontology and upstream regulation tools the relationships with energy metabolism and reproduction in two groups of primiparous dairy cows with extreme NEB statuses (NEB < -9 Mcal/day vs. NEB > -9 Mcal/day) around parturition. The second objective was to determine the potential involvement of a new adipokine identified as a candidate for the regulation of ovarian function in our RNA-seq analysis by using bovine primary granulosa culture, thymidine incorporation to determine cell proliferation and ELISA assays to measure progesterone secretion. The RNA-seq analysis revealed that 514 genes were over-expressed and 695 were under-expressed in the adipose tissue of cows with severe NEB (SNEB) and cows with moderate NEB (MNEB) during the -4 and 16 wkpp period. In addition, 491 genes were over-expressed and 705 genes were under-expressed in the adipose tissue of SNEB cows compared to MNEB cows. Among these differently expressed genes (DEGs), 298 were related to metabolic functions and 264 to reproductive traits. A set of 19 DEGs were validated by RT-qPCR, including CCL21 (C-C motif chemokine ligand 21). Moreover, CCL21, a gene known to be secreted by adipose tissue, was chosen for further analysis in plasma and ovaries. The use of next-generation sequencing technologies allowed us to characterise the transcriptome of white adipose tissue from primiparous cows with different levels of NEB during lactation. This study highlighted the alteration of the expression of genes related to lipid metabolism, including CCL21, which is released in the bloodstream and associated with the in vitro regulation of ovarian functions.

Indexed as

DairyingAnimal Nutritional Physiological PhenomenaAnimalsBody WeightCattleChemokine CCL21Energy MetabolismFemaleGene Expression RegulationGenitaliaLactationLipid MetabolismMetabolic DiseasesRNA-SeqSeverity of Illness IndexSubcutaneous FatChemokine CCL21

Identifiers

PMID31557215
PMCPMC6763198
OpenAlexW2975179657

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.