Evidence map›Paper›PMID 31557202›Full record

ArticlePloS one2019

Transcriptomic changes triggered by ouabain in rat cerebellum granule cells: Role of α3- and α1-Na+,K+-ATPase-mediated signaling.

Larisa V Smolyaninova, Alexandra A Shiyan, Leonid V Kapilevich, Alexander V Lopachev, Tatiana N Fedorova, Tatiana S Klementieva, Aleksey A Moskovtsev, Aslan A Kubatiev, Sergei N Orlov

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In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Larisa V SmolyaninovaDepartment of Biomembranes, Faculty of Biology, M. V. Lomonosov Moscow State University, Moscow, Russia.ORCID 0000-0002-8983-9659
Alexandra A ShiyanDepartment of Biomembranes, Faculty of Biology, M. V. Lomonosov Moscow State University, Moscow, Russia.
Leonid V KapilevichDepartment of Sports Tourism Sports Physiology and Medicine, National Research Tomsk State University, Tomsk, Russia.
Alexander V LopachevLaboratory of Clinical and Experimental Neurochemistry, Research Center of Neurology, Moscow, Russia.
Tatiana N FedorovaLaboratory of Clinical and Experimental Neurochemistry, Research Center of Neurology, Moscow, Russia.
Tatiana S KlementievaDepartment of Molecular and Cell Pathophysiology, Institute of General Pathology and Pathophysiology, Moscow, Russia.
Aleksey A MoskovtsevDepartment of Molecular and Cell Pathophysiology, Institute of General Pathology and Pathophysiology, Moscow, Russia.
Aslan A KubatievDepartment of Molecular and Cell Pathophysiology, Institute of General Pathology and Pathophysiology, Moscow, Russia.
Sergei N OrlovDepartment of Biomembranes, Faculty of Biology, M. V. Lomonosov Moscow State University, Moscow, Russia.
National Research Tomsk State University · RUResearch Institute of General Pathology and Pathophysiology, the Russian Academy of Medical Sciences · RUResearch Center of Neurology · RULomonosov Moscow State University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

It was shown previously that inhibition of the ubiquitous α1 isoform of Na+,K+-ATPase by ouabain sharply affects gene expression profile via elevation of intracellular [Na+]i/[K+]i ratio. Unlike other cells, neurons are abundant in the α3 isoform of Na+,K+-ATPase, whose affinity in rodents to ouabain is 104-fold higher compared to the α1 isoform. With these sharp differences in mind, we compared transcriptomic changes in rat cerebellum granule cells triggered by inhibition of α1- and α3-Na+,K+-ATPase isoforms. Inhibition of α1- and α3-Na+,K+-ATPase isoforms by 1 mM ouabain resulted in dissipation of transmembrane Na+ and K+ gradients and differential expression of 994 transcripts, whereas selective inhibition of α3-Na+,K+-ATPase isoform by 100 nM ouabain affected expression of 144 transcripts without any impact on the [Na+]i/[K+]i ratio. The list of genes whose expression was affected by 1 mM ouabain by more than 2-fold was abundant in intermediates of intracellular signaling and transcription regulators, including augmented content of Npas4, Fos, Junb, Atf3, and Klf4 mRNAs, whose upregulated expression was demonstrated in neurons subjected to electrical and glutamatergic stimulation. The role [Na+]i/[K+]i-mediated signaling in transcriptomic changes involved in memory formation and storage should be examined further.

Indexed as

AnimalsCardiotonic AgentsCells, CulturedCerebellumCytoplasmic GranulesGene Expression ProfilingGene Expression RegulationIsoenzymesKruppel-Like Factor 4NeuronsOuabainPrimary Cell CultureRatsSignal TransductionSodium-Potassium-Exchanging ATPaseTranscription, GeneticCardiotonic AgentsIsoenzymesKlf4 protein, ratKruppel-Like Factor 4OuabainSodium-Potassium-Exchanging ATPase

Identifiers

PMID31557202
PMCPMC6762055
OpenAlexW2977371516

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.