Evidence map›Paper›PMID 31556620›Full record

ArticleJournal of proteome research2019

2018 YPIC Challenge: A Case Study in Characterizing an Unknown Protein Sample.

Lindsay Pino, Andy Lin, Wout Bittremieux

Abstract read
In one paragraph

Article in Journal of proteome research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Lindsay PinoDepartment of Genome Sciences , University of Washington , Seattle , Washington 98195 , United States.ORCID 0000-0003-1857-7222
Andy LinDepartment of Genome Sciences , University of Washington , Seattle , Washington 98195 , United States.ORCID 0000-0003-0072-612X
Wout BittremieuxDepartment of Genome Sciences , University of Washington , Seattle , Washington 98195 , United States.ORCID 0000-0002-3105-1359
University of Washington · USUniversity of Antwerp · BE

Funding

Molecular phenotyping of the yeast replicative life span response to genetic and environmental modulatorsF31AG055257 · NIA · UNIVERSITY OF WASHINGTON · PI PINO, LINDSAY K · 2016 to 2018
$119k
NIA NIH HHS F31 AG055257
6 · The paper itself

Abstract

For the 2018 YPIC Challenge, contestants were invited to try to decipher two unknown English questions encoded by a synthetic protein expressed in

Indexed as

Protein Processing, Post-TranslationalAmino Acid SequenceComputational BiologyEscherichia coliPeptidesProtein BiosynthesisProteinsProteomicsSequence Analysis, ProteinSoftwareTandem Mass SpectrometryPeptidesProteinsde novomass spectrometryproteomicsspectral clusteringspectral networking

Identifiers

PMID31556620
PMCPMC6824964
OpenAlexW2952984704

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.