Evidence map›Paper›PMID 31556165›Full record

ArticleJournal of clinical laboratory analysis2020

Development and validation of a haplotype-free technique for non-invasive prenatal diagnosis of spinal muscular atrophy.

Xianda Wei, Weigang Lv, Hu Tan, Desheng Liang, Lingqian Wu

Open access · goldAbstract readValidation Study
In one paragraph

Article in Journal of clinical laboratory analysis, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.8field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Non-invasive prenatal diagnosis (NIPD): current and emerging technologies.Extracellular vesicles and circulating nucleic acids · 2023
    Review
  5. Article
  6. Article
  7. Improved noninvasive fetal variant calling using standardized benchmarking approaches.Computational and structural biotechnology journal · 2021
    Article
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Xianda WeiCenter for Medical Genetics, School of Life Sciences, Central South University, Changsha, China.ORCID https://orcid.org/0000-0002-2665-0242
Weigang LvHunan Jiahui Genetics Hospital, Changsha, China.
Hu TanCenter for Medical Genetics, School of Life Sciences, Central South University, Changsha, China.
Desheng LiangCenter for Medical Genetics, School of Life Sciences, Central South University, Changsha, China.
Lingqian WuCenter for Medical Genetics, School of Life Sciences, Central South University, Changsha, China.
Central South University · CN

Funding

National Natural Science Foundation of China 81501268National Natural Science Foundation of China 81571450
6 · The paper itself

Abstract

objectiveTo develop a technique for non-invasive prenatal diagnosis of spinal muscular atrophy and validate its performance. STUDY

designPregnant women with 1 copy of SMN1 and male fetuses were enrolled. Seventeen women were included in test set A, and 10 of them were selected into test set B randomly and blinded. The two sets were tested independently by two different researchers blinded to fetal genotypes. Fetal DNA fractions were calculated based on the relative proportion of mapped chromosome Y sequencing reads. An algorithm was developed to decide fetal SMN1 copy numbers.

resultsThe concordance rate with the results of MLPA testing of amniocyte DNA was 94.12% in test set A and 90% in set B. For all tests with a classifiable result, the percent of agreement with the results of MLPA testing of amniocyte DNA was up to 100% (25/25).

conclusionWe have developed a direct, rapid, and low-cost technique, which has a potential to be utilized for first-trimester non-invasive prenatal diagnosis and screening for spinal muscular atrophy with considerable reliability and feasibility.

Indexed as

Cell-Free Nucleic AcidsFemaleGene DosageHaplotypesHumansMaleMaternal Serum Screening TestsMuscular Atrophy, SpinalNoninvasive Prenatal TestingPolymerase Chain ReactionPregnancyPregnancy Trimester, SecondSurvival of Motor Neuron 1 ProteinCell-Free Nucleic AcidsSMN1 protein, humanSurvival of Motor Neuron 1 Proteincell-free DNAdigital PCRnon-invasive prenatal diagnosisprenatal screeningspinal muscular atrophy

Identifiers

PMID31556165
PMCPMC7031576
OpenAlexW2975470426

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.