Evidence map›Paper›PMID 31554283›Full record

ArticleInternational journal of molecular sciences2019

Causes and Consequences of A Glutamine Induced Normoxic HIF1 Activity for the Tumor Metabolism.

Matthias Kappler, Ulrike Pabst, Claus Weinholdt, Helge Taubert, Swetlana Rot, Tom Kaune, Johanna Kotrba, Martin Porsch, Antje Güttler, Matthias Bache and 11 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.1field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 27 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 3 institutions in 1 country.

Matthias KapplerDepartment of Oral and Maxillofacial Plastic Surgery, Martin Luther University Halle-Wittenberg, 06120 Halle (Saale), Germany. matthias.kappler@uk-halle.de.ORCID 0000-0003-2002-0271
Ulrike PabstDepartment of Oral and Maxillofacial Plastic Surgery, Martin Luther University Halle-Wittenberg, 06120 Halle (Saale), Germany. pabst.ulrike@gmail.com.
Claus WeinholdtInstitute of Computer Science, Martin Luther University Halle-Wittenberg, 06120 Halle (Saale), Germany. claus.weinholdt@informatik.uni-halle.de.ORCID 0000-0002-0546-5232
Helge TaubertClinic of Urology and Pediatric Urology, FA University Hospital Erlangen-Nürnberg, 91054 Erlangen, Germany. Helge.Taubert@uk-erlangen.de.ORCID 0000-0002-9077-1727
Swetlana RotDepartment of Oral and Maxillofacial Plastic Surgery, Martin Luther University Halle-Wittenberg, 06120 Halle (Saale), Germany. swetlana.rot@medizin.uni-halle.de.
Tom KauneDepartment of Oral and Maxillofacial Plastic Surgery, Martin Luther University Halle-Wittenberg, 06120 Halle (Saale), Germany. tom.kaune@uk-halle.de.
Johanna KotrbaDepartment of Oral and Maxillofacial Plastic Surgery, Martin Luther University Halle-Wittenberg, 06120 Halle (Saale), Germany. johanna.kotrba@med.ovgu.de.
Martin PorschCore Facility Deep Sequencing, Institute of Computer Science, and Institute of Human Genetics, Martin Luther University Halle-Wittenberg, 06120 Halle (Saale), Germany. martin.porsch@informatik.uni-halle.de.ORCID 0000-0003-3431-2507
Antje GüttlerDepartment of Radiotherapy, Martin Luther University Halle-Wittenberg, 06120 Halle (Saale), Germany. antje.guettler@uk-halle.de.
Matthias BacheDepartment of Radiotherapy, Martin Luther University Halle-Wittenberg, 06120 Halle (Saale), Germany. matthias.bache@uk-halle.de.
Knut KrohnCore Unit DNA Technologies, University of Leipzig, 04103 Leipzig, Germany. krok@med.uni-leipzig.de.
Fabian BullCore Facility Deep Sequencing, Institute of Computer Science, and Institute of Human Genetics, Martin Luther University Halle-Wittenberg, 06120 Halle (Saale), Germany. fabian.bull@informatik.uni-halle.de.
Anne RiemannInstitute of Physiology, Martin Luther University Halle-Wittenberg, 06110 Halle (Saale), Germany. anne.riemann@medizin.uni-halle.de.
Claudia WickenhauserInstitute of Pathology, Martin-Luther-University Halle-Wittenberg, 06110 Halle (Saale), Germany. claudia.wickenhauser@uk-halle.de.
Barbara SeligerInstitute of Medical Immunology, Martin-Luther-University Halle-Wittenberg, 06110 Halle (Saale), Germany. barbara.seliger@uk-halle.de.
Johannes SchubertDepartment of Oral and Maxillofacial Plastic Surgery, Martin Luther University Halle-Wittenberg, 06120 Halle (Saale), Germany. mkg.sekretariat@uk-halle.de.
Bilal Al-NawasDepartment of Oral and Maxillofacial Plastic Surgery, Martin Luther University Halle-Wittenberg, 06120 Halle (Saale), Germany. al-nawas@uni-mainz.de.ORCID 0000-0002-8665-5803
Oliver ThewsInstitute of Physiology, Martin Luther University Halle-Wittenberg, 06110 Halle (Saale), Germany. oliver.thews@medizin.uni-halle.de.
Ivo GrosseInstitute of Computer Science, Martin Luther University Halle-Wittenberg, 06120 Halle (Saale), Germany. grosse@informatik.uni-halle.de.
Dirk VordermarkDepartment of Radiotherapy, Martin Luther University Halle-Wittenberg, 06120 Halle (Saale), Germany. dirk.vordermark@uk-halle.de.
Alexander W EckertDepartment of Oral and Maxillofacial Plastic Surgery, Martin Luther University Halle-Wittenberg, 06120 Halle (Saale), Germany. alexander.eckert@uk-halle.de.
Martin Luther University Halle-Wittenberg · DEFriedrich-Alexander-Universität Erlangen-Nürnberg · DEGerman Centre for Integrative Biodiversity Research · DE

Funding

Open Access Publication Fund of the Martin Luther University Halle-Wittenberg .
6 · The paper itself

Abstract

The transcription factor hypoxia-inducible factor 1 (HIF1) is the crucial regulator of genes that are involved in metabolism under hypoxic conditions, but information regarding the transcriptional activity of HIF1 in normoxic metabolism is limited. Different tumor cells were treated under normoxic and hypoxic conditions with various drugs that affect cellular metabolism. HIF1α was silenced by siRNA in normoxic/hypoxic tumor cells, before RNA sequencing and bioinformatics analyses were performed while using the breast cancer cell line MDA-MB-231 as a model. Differentially expressed genes were further analyzed and validated by qPCR, while the activity of the metabolites was determined by enzyme assays. Under normoxic conditions, HIF1 activity was significantly increased by (i) glutamine metabolism, which was associated with the release of ammonium, and it was decreased by (ii) acetylation via acetyl CoA synthetase (ACSS2) or ATP citrate lyase (ACLY), respectively, and (iii) the presence of L-ascorbic acid, citrate, or acetyl-CoA. Interestingly, acetylsalicylic acid, ibuprofen, L-ascorbic acid, and citrate each significantly destabilized HIF1α only under normoxia. The results from the deep sequence analyses indicated that, in HIF1-siRNA silenced MDA-MB-231 cells, 231 genes under normoxia and 1384 genes under hypoxia were transcriptionally significant deregulated in a HIF1-dependent manner. Focusing on glycolysis genes, it was confirmed that HIF1 significantly regulated six normoxic and 16 hypoxic glycolysis-associated gene transcripts. However, the results from the targeted metabolome analyses revealed that HIF1 activity affected neither the consumption of glucose nor the release of ammonium or lactate; however, it significantly inhibited the release of the amino acid alanine. This study comprehensively investigated, for the first time, how normoxic HIF1 is stabilized, and it analyzed the possible function of normoxic HIF1 in the transcriptome and metabolic processes of tumor cells in a breast cancer cell model. Furthermore, these data imply that HIF1 compensates for the metabolic outcomes of glutaminolysis and, subsequently, the Warburg effect might be a direct consequence of the altered amino acid metabolism in tumor cells.

Indexed as

Energy MetabolismAcetylationAscorbic AcidCarbonic Anhydrase IXCell Line, TumorGene Expression ProfilingGene Expression Regulation, NeoplasticGlutamineGlycolysisHigh-Throughput Nucleotide SequencingHumansHypoxiaHypoxia-Inducible Factor 1, alpha SubunitNeoplasmsProtein StabilityRNA, Small InterferingAscorbic AcidCarbonic Anhydrase IXGlutamineHIF1A protein, humanHypoxia-Inducible Factor 1, alpha SubunitRNA, Small Interferingacetylsalicylic acidglutamineglutaminolysisglycolysisHIF1αhypoxiaL-ascorbic acidmetabolismnormoxiatumorWarburg effect

Identifiers

PMID31554283
PMCPMC6802203
OpenAlexW2975185384

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.