Evidence map›Paper›PMID 31552430›Full record

ArticleJournal of experimental botany2019

Autophagy is involved in assisting the replication of Bamboo mosaic virus in Nicotiana benthamiana.

Ying-Ping Huang, Ying-Wen Huang, Yung-Jen Hsiao, Siou-Cen Li, Yau-Huei Hsu, Ching-Hsiu Tsai

Open access · greenAbstract read
In one paragraph

Article in Journal of experimental botany, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
11.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 45 citations in OpenAlex.

  1. Review
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  6. Proviral insights of glycolytic enolase inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Article
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  9. Viruses and autophagy: bend, but don't break.Nature reviews. Microbiology · 2024
    Review
  10. Article
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  15. Review
  16. Autophagy in the Lifetime of Plants: From Seed to Seed.International journal of molecular sciences · 2022
    Review
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Ying-Ping HuangGraduate Institute of Biotechnology, National Chung Hsing University, Taichung, Taiwan.
Ying-Wen HuangGraduate Institute of Biotechnology, National Chung Hsing University, Taichung, Taiwan.
Yung-Jen HsiaoGraduate Institute of Biotechnology, National Chung Hsing University, Taichung, Taiwan.
Siou-Cen LiGraduate Institute of Biotechnology, National Chung Hsing University, Taichung, Taiwan.
Yau-Huei HsuGraduate Institute of Biotechnology, National Chung Hsing University, Taichung, Taiwan.
Ching-Hsiu TsaiGraduate Institute of Biotechnology, National Chung Hsing University, Taichung, Taiwan.
National Chung Hsing University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Autophagy plays a critical role in plants under biotic stress, including the response to pathogen infection. We investigated whether autophagy-related genes (ATGs) are involved in infection with Bamboo mosaic virus (BaMV), a single-stranded positive-sense RNA virus. Initially, we observed that BaMV infection in Nicotiana benthamiana leaves upregulated the expression of ATGs but did not trigger cell death. The induction of ATGs, which possibly triggers autophagy, increased rather than diminished BaMV accumulation in the leaves, as revealed by gene knockdown and transient expression experiments. Furthermore, the inhibitor 3-methyladenine blocked autophagosome formation and the autophagy inducer rapamycin, which negatively and positively affected BaMV accumulation, respectively. Pull-down experiments with an antibody against orange fluorescent protein (OFP)-NbATG8f, an autophagosome marker protein, showed that both plus- and minus-sense BaMV RNAs could associate with NbATG8f. Confocal microscopy revealed that ATG8f-enriched vesicles possibly derived from chloroplasts contained both the BaMV viral RNA and its replicase. Thus, BaMV infection may induce the expression of ATGs possibly via autophagy to selectively engulf a portion of viral RNA-containing chloroplast. Virus-induced vesicles enriched with ATG8f could provide an alternative site for viral RNA replication or a shelter from the host silencing mechanism.

Indexed as

AutophagyVirus ReplicationChloroplastsNicotianaPlant DiseasesPotexvirus3-MAATG5autophagyBaMVchlorophagychloroplastrapamycinviral RNA replication

Identifiers

PMID31552430
PMCPMC6760330
OpenAlexW2971689870

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.